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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

ACSF2; ACSF3; ACSL1

Species

P.mammillata

Unique Gene ID

Phmamm.g00000010

Gene Model ID

Phmamm.CG.MTP2014.S1.g00010

Location

S1:58255..62868

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1.g00010.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA13YL06

Plate: Plate_13_L06

AHC0AAA236YE23

Plate: Plate_236_E23

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
AMP-bd_C Pfam AMP-binding enzyme, C-terminal domain
AMP-dep_Synth/Lig Pfam AMP-dependent synthetase/ligase
AMP-binding_CS ProSitePatterns AMP-binding, conserved site

GOSlim

22 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
catalytic activity Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
peroxisome Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
plasma membrane Blast cellular component
metabolic process InterProScan biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
ligase activity Blast molecular function
organelle membrane Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
cellular metabolic process Blast biological process
organic substance metabolic process Blast biological process
whole membrane Blast cellular component
mitochondrial membrane Blast cellular component
bounding membrane of organelle Blast cellular component
intracellular organelle part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 154 5.04e-40
catalytic activity Hs molecular function 154 5.04e-40
acyl-CoA ligase activity Hs molecular function 154 5.04e-40
long-chain fatty acid-CoA ligase activity Hs molecular function 135 8.28e-34
protein binding Hs molecular function 154 5.04e-40
ATP binding Hs molecular function 154 5.04e-40
mitochondrion Hs cellular component 154 5.04e-40
mitochondrial outer membrane Hs cellular component 135 8.28e-34
mitochondrial matrix Hs cellular component 154 5.04e-40
peroxisome Hs cellular component 135 8.28e-34
peroxisomal membrane Hs cellular component 135 8.28e-34
endoplasmic reticulum Hs cellular component 135 8.28e-34
endoplasmic reticulum membrane Hs cellular component 135 8.28e-34
plasma membrane Hs cellular component 135 8.28e-34
membrane Hs cellular component 135 8.28e-34
integral component of membrane Hs cellular component 135 8.28e-34
ligase activity Hs molecular function 154 5.04e-40
acid-thiol ligase activity Hs molecular function 132 7.21e-33
organelle membrane Hs cellular component 135 8.28e-34
very long-chain fatty acid-CoA ligase activity Hs molecular function 132 7.21e-33
intracellular membrane-bounded organelle Hs cellular component 135 8.28e-34
malonyl-CoA synthetase activity Hs molecular function 132 7.21e-33
decanoate--CoA ligase activity Hs molecular function 135 8.28e-34

GO (InterProScan)

2 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 1.5E-100
metabolic process Pfam biological process 1.5E-100