Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

ACSF2; ACSF3; ACSL6

Species

P.mammillata

Unique Gene ID

Phmamm.g00000009

Gene Model ID

Phmamm.CG.MTP2014.S1.g00009

Location

S1:49607..57109

Transcript Models and Sequences

Phmamm.CG.MTP2014.S1.g00009.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
AMP-binding_CS	ProSitePatterns	AMP-binding, conserved site
AMP-bd_C	Pfam	AMP-binding enzyme, C-terminal domain
AMP-dep_Synth/Lig	Pfam	AMP-dependent synthetase/ligase

GOSlim

23 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
catalytic activity	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
mitochondrion	Blast	cellular component
mitochondrial matrix	Blast	cellular component
peroxisome	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
plasma membrane	Blast	cellular component
metabolic process	InterProScan	biological process
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
ligase activity	Blast	molecular function
organelle membrane	Blast	cellular component
protein homodimerization activity	Blast	molecular function
intracellular membrane-bounded organelle	Blast	cellular component
cellular metabolic process	Blast	biological process
organic substance metabolic process	Blast	biological process
whole membrane	Blast	cellular component
mitochondrial membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
intracellular organelle part	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	142	2.01e-35
catalytic activity	Hs	molecular function	142	2.01e-35
acyl-CoA ligase activity	Hs	molecular function	142	2.01e-35
long-chain fatty acid-CoA ligase activity	Hs	molecular function	119	1.12e-27
protein binding	Hs	molecular function	142	2.01e-35
ATP binding	Hs	molecular function	142	2.01e-35
mitochondrion	Hs	cellular component	142	2.01e-35
mitochondrial outer membrane	Hs	cellular component	119	1.12e-27
mitochondrial matrix	Hs	cellular component	142	2.01e-35
peroxisome	Hs	cellular component	119	1.12e-27
peroxisomal membrane	Hs	cellular component	119	1.12e-27
endoplasmic reticulum	Hs	cellular component	119	1.12e-27
endoplasmic reticulum membrane	Hs	cellular component	119	1.12e-27
plasma membrane	Hs	cellular component	119	1.12e-27
membrane	Hs	cellular component	119	1.12e-27
integral component of membrane	Hs	cellular component	119	1.12e-27
ligase activity	Hs	molecular function	142	2.01e-35
acid-thiol ligase activity	Hs	molecular function	130	9.48e-32
organelle membrane	Hs	cellular component	119	1.12e-27
very long-chain fatty acid-CoA ligase activity	Hs	molecular function	130	9.48e-32
protein homodimerization activity	Hs	molecular function	119	1.12e-27
intracellular membrane-bounded organelle	Hs	cellular component	119	1.12e-27
malonyl-CoA synthetase activity	Hs	molecular function	130	9.48e-32
decanoate--CoA ligase activity	Hs	molecular function	119	1.12e-27

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
catalytic activity	Pfam	molecular function	8.1E-80
metabolic process	Pfam	biological process	8.1E-80