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GENE CARD

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  1. Gene 'Phfumi.CG.MTP2014.S1...'

Gene Card

Best human hits

CIR1; RP9

Species

P.fumigata

Unique Gene ID

Phfumi.g00009628

Gene Model ID

Phfumi.CG.MTP2014.S18597.g09628

Location

S18597:402..1464

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S18597.g09628.01.t
Phfumi.CG.MTP2014.S18597.g09628.02.t
Phfumi.CG.MTP2014.S18597.g09628.03.t

External Database Gene Card

External database links

No result

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
CIR_N_dom Pfam CBF1-interacting co-repressor CIR, N-terminal domain
CIR_N_dom SMART CBF1-interacting co-repressor CIR, N-terminal domain

GOSlim

25 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
transcription corepressor activity Orthology molecular function
RNA binding Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Blast cellular component
cytoskeleton Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
mRNA processing Orthology biological process
zinc ion binding Blast molecular function
RNA splicing Orthology biological process
nuclear speck Orthology cellular component
protein kinase binding Orthology molecular function
macromolecular complex Orthology cellular component
negative regulation of transcription, DNA-templated Orthology biological process
metal ion binding Blast molecular function
nucleoplasm part Orthology cellular component
endoplasmic reticulum membrane Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
histone deacetylase complex Hs cellular component
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function
transcription corepressor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
centrosome Hs cellular component
microtubule organizing center Hs cellular component
cytoskeleton Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
mRNA processing Hs biological process
RNA splicing Hs biological process
nuclear speck Hs cellular component
protein kinase binding Hs molecular function
macromolecular complex Hs cellular component
negative regulation of transcription, DNA-templated Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
histone deacetylase complex Hs cellular component 236 2.20e-74
nucleic acid binding Hs molecular function 38.1 0.004
transcription factor activity, sequence-specific DNA binding Hs molecular function 236 2.20e-74
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 236 2.20e-74
transcription corepressor activity Hs molecular function 236 2.20e-74
RNA binding Hs molecular function 38.1 0.004
protein binding Hs molecular function 236 2.20e-74
nucleus Hs cellular component 236 2.20e-74
cytoplasm Hs cellular component 236 2.20e-74
signal recognition particle receptor complex Hs cellular component 38.1 0.004
centrosome Hs cellular component 236 2.20e-74
microtubule organizing center Hs cellular component 236 2.20e-74
cytosol Hs cellular component 38.1 0.004
cytoskeleton Hs cellular component 236 2.20e-74
zinc ion binding Hs molecular function 38.1 0.004
nuclear speck Hs cellular component 236 2.20e-74
protein kinase binding Hs molecular function 236 2.20e-74
macromolecular complex Hs cellular component 236 2.20e-74
metal ion binding Hs molecular function 38.1 0.004

GO (InterProScan)

1 result

GO Term Analysis Type e-value
transcription corepressor activity PANTHER molecular function 1.5E-97

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