Aniseed - Gene card

Gene 'Phfumi.CG.MTP2014.S1...'

Gene Card

Best human hits

CEP170B; SLC4A1AP; SNIP1

Species

P.fumigata

Unique Gene ID

Phfumi.g00003775

Gene Model ID

Phfumi.CG.MTP2014.S1481.g03775

Location

S1481:17008..19821

Transcript Models and Sequences

Phfumi.CG.MTP2014.S1481.g03775.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
SMAD_FHA_dom_sf	SUPERFAMILY	SMAD/FHA domain superfamily
FHA_dom	ProSiteProfiles	Forkhead-associated (FHA) domain
FHA_dom	CDD	Forkhead-associated (FHA) domain
FHA_dom	Pfam	Forkhead-associated (FHA) domain
FHA_dom	SMART	Forkhead-associated (FHA) domain

GOSlim

16 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Blast	cellular component
microtubule	Blast	cellular component
plasma membrane	Blast	cellular component
regulation of transcription, DNA-templated	Orthology	biological process
intracellular membrane-bounded organelle	Blast	cellular component
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
negative regulation of gene expression	Orthology	biological process
cellular process	Orthology	biological process
RNA processing	Orthology	biological process

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
mRNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytosol	Hs	cellular component
regulation of transcription, DNA-templated	Hs	biological process
I-kappaB kinase/NF-kappaB signaling	Hs	biological process
gene silencing by RNA	Hs	biological process
production of miRNAs involved in gene silencing by miRNA	Hs	biological process

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	278	4.57e-91
mRNA binding	Hs	molecular function	278	4.57e-91
protein binding	Hs	molecular function	278	4.57e-91
nucleus	Hs	cellular component	278	4.57e-91
nucleoplasm	Hs	cellular component	278	4.57e-91
cytoplasm	Hs	cellular component	67.8	2.74e-12
cytosol	Hs	cellular component	278	4.57e-91
cytoskeleton	Hs	cellular component	59.7	1.47e-09
microtubule	Hs	cellular component	59.7	1.47e-09
plasma membrane	Hs	cellular component	67.8	2.74e-12
intracellular membrane-bounded organelle	Hs	cellular component	67.8	2.74e-12

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	2.49E-24