Aniseed - Gene card

Gene 'Phfumi.CG.MTP2014.S3...'

Gene Card

Best human hits

TAF8

Species

P.fumigata

Unique Gene ID

Phfumi.g00000079

Gene Model ID

Phfumi.CG.MTP2014.S3.g00079

Location

S3:295298..297734

Transcript Models and Sequences

Phfumi.CG.MTP2014.S3.g00079.01.t
Phfumi.CG.MTP2014.S3.g00079.02.t
Phfumi.CG.MTP2014.S3.g00079.03.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
TFIID_su8_C	Pfam	Transcription factor TFIID, subunit 8, C-terminal
TFIID_su8_C	CDD	Transcription factor TFIID, subunit 8, C-terminal
Histone-fold	Gene3D	Histone-fold
BTP	Pfam	Bromodomain associated domain
Histone-fold	SUPERFAMILY	Histone-fold
BTP	SMART	Bromodomain associated domain

GOSlim

16 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
multicellular organism development	Orthology	biological process
cell differentiation	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
protein heterodimerization activity	Orthology	molecular function
perinuclear region of cytoplasm	Orthology	cellular component
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
transcription from RNA polymerase II promoter	Orthology	biological process
cellular process	Orthology	biological process
protein localization to organelle	Orthology	biological process

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor TFIID complex	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
multicellular organism development	Hs	biological process
cell differentiation	Hs	biological process
snRNA transcription from RNA polymerase II promoter	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
protein heterodimerization activity	Hs	molecular function
perinuclear region of cytoplasm	Hs	cellular component
maintenance of protein location in nucleus	Hs	biological process

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	173	1.09e-52
nucleus	Hs	cellular component	173	1.09e-52
nucleoplasm	Hs	cellular component	173	1.09e-52
transcription factor TFIID complex	Hs	cellular component	173	1.09e-52
cytoplasm	Hs	cellular component	173	1.09e-52
protein heterodimerization activity	Hs	molecular function	173	1.09e-52
perinuclear region of cytoplasm	Hs	cellular component	173	1.09e-52

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein heterodimerization activity	Gene3D	molecular function	2.1E-11