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GENE CARD

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Gene Card

Best human hits

H2AFV; H2AFZ; HIST2H2AC

Species

M.oculata

Unique Gene ID

Moocul.g00003698

Gene Model ID

Moocul.CG.ELv1_2.S59369.g03698

Location

S59369:10359..25033

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S59369.g03698.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Histone-fold Gene3D Histone-fold
Histone_H2A/H2B/H3 Pfam Histone H2A/H2B/H3
Maelstrom Pfam Maelstrom domain
Histone_H2A_C Pfam Histone H2A, C-terminal domain
Histone_H2A PRINTS Histone H2A
Histone_H2A CDD Histone H2A
Histone_H2A SMART Histone H2A
Histone-fold SUPERFAMILY Histone-fold
HMG_box_dom Pfam High mobility group box domain
Histone_H2A_CS ProSitePatterns Histone H2A conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
DNA binding Hs molecular function
nucleus Hs cellular component
regulation of gene silencing by miRNA Hs biological process
negative regulation of transcription from RNA polymerase II promoter Hs biological process
chromatin Hs cellular component
cell morphogenesis Hs biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
XY body Hs cellular component
cytoplasm Hs cellular component
cellular response to DNA damage stimulus Hs biological process
synapsis Hs biological process
male meiotic nuclear division Hs biological process
multicellular organism development Hs biological process
spermatogenesis Hs biological process
intrinsic apoptotic signaling pathway in response to DNA damage Hs biological process
fertilization Hs biological process
negative regulation of gene expression Hs biological process
cell differentiation Hs biological process
autosome Hs cellular component
gene silencing by RNA Hs biological process
chromatoid body Hs cellular component
piRNA metabolic process Hs biological process
DNA methylation involved in gamete generation Hs biological process
negative regulation of apoptotic process Hs biological process
P granule Hs cellular component
sequence-specific DNA binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
regulation of organ growth Hs biological process
perinuclear region of cytoplasm Hs cellular component
meiotic cell cycle Hs biological process
piP-body Hs cellular component

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleosome Hs cellular component 243 1.46e-78
nuclear chromatin Hs cellular component 243 1.46e-78
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 242 2.98e-78
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function 242 2.98e-78
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 242 2.98e-78
DNA binding Hs molecular function 243 1.46e-78
protein binding Hs molecular function 242 2.98e-78
nucleus Hs cellular component 243 1.46e-78
chromosome Hs cellular component 243 1.46e-78
nuclear euchromatin Hs cellular component 242 2.98e-78
nuclear heterochromatin Hs cellular component 242 2.98e-78
chromatin DNA binding Hs molecular function 242 2.98e-78
nucleosomal DNA binding Hs molecular function 242 2.98e-78
protein heterodimerization activity Hs molecular function 243 1.46e-78
extracellular exosome Hs cellular component 243 1.46e-78

GO (InterProScan)

5 results

GO Term Analysis Type e-value
nucleosome SMART cellular component 1.3E-72
DNA binding SMART molecular function 1.3E-72
nucleus SMART cellular component 1.3E-72
protein heterodimerization activity Gene3D molecular function 2.9E-53
regulation of gene silencing by miRNA Pfam biological process 1.7E-19