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GENE CARD

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Gene Card

Best human hits

HNRNPK; PCBP2; PCBP3

Species

M.oculata

Unique Gene ID

Moocul.g00000009

Gene Model ID

Moocul.CG.ELv1_2.S781.g00009

Location

S781:324..11014

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S781.g00009.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily
KH_dom_type_1 Pfam K Homology domain, type 1
KH_dom SMART K Homology domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
mRNA splicing, via spliceosome Hs biological process
nuclear chromatin Hs cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
podosome Hs cellular component
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
single-stranded DNA binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
cytoplasm Hs cellular component
focal adhesion Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
RNA processing Hs biological process
mRNA processing Hs biological process
signal transduction Hs biological process
RNA splicing Hs biological process
membrane Hs cellular component
viral process Hs biological process
RNA metabolic process Hs biological process
protein domain specific binding Hs molecular function
cell junction Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
identical protein binding Hs molecular function
cell projection Hs cellular component
negative regulation of apoptotic process Hs biological process
cadherin binding Hs molecular function
positive regulation of transcription from RNA polymerase II promoter Hs biological process
negative regulation of mRNA splicing, via spliceosome Hs biological process
positive regulation of receptor-mediated endocytosis Hs biological process
extracellular exosome Hs cellular component
catalytic step 2 spliceosome Hs cellular component

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 140 3.61e-38
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 140 3.61e-38
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 140 3.61e-38
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 134 2.00e-36
podosome Hs cellular component 140 3.61e-38
nucleic acid binding Hs molecular function 140 3.61e-38
DNA binding Hs molecular function 140 3.61e-38
double-stranded DNA binding Hs molecular function 134 2.00e-36
single-stranded DNA binding Hs molecular function 140 3.61e-38
RNA binding Hs molecular function 140 3.61e-38
protein binding Hs molecular function 140 3.61e-38
nucleus Hs cellular component 140 3.61e-38
nucleoplasm Hs cellular component 140 3.61e-38
spliceosomal complex Hs cellular component 140 3.61e-38
cytoplasm Hs cellular component 140 3.61e-38
cytosol Hs cellular component 134 2.00e-36
focal adhesion Hs cellular component 140 3.61e-38
membrane Hs cellular component 140 3.61e-38
enzyme binding Hs molecular function 129 1.65e-34
protein domain specific binding Hs molecular function 140 3.61e-38
cell junction Hs cellular component 140 3.61e-38
intracellular ribonucleoprotein complex Hs cellular component 140 3.61e-38
ubiquitin protein ligase binding Hs molecular function 129 1.65e-34
identical protein binding Hs molecular function 140 3.61e-38
cell projection Hs cellular component 140 3.61e-38
cadherin binding Hs molecular function 140 3.61e-38
extracellular exosome Hs cellular component 140 3.61e-38
catalytic step 2 spliceosome Hs cellular component 140 3.61e-38
C-rich single-stranded DNA binding Hs molecular function 134 2.00e-36

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 6.3E-12
RNA binding Gene3D molecular function 6.5E-24

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