Aniseed - Gene card

Gene Card

Best human hits

GRWD1; RBBP4; RBBP7

Species

M.occidentalis

Unique Gene ID

Moocci.g00021206

Gene Model ID

Moocci.CG.ELv1_2.S548031.g21206

Location

S548031:9599..11420

Transcript Models and Sequences

Moocci.CG.ELv1_2.S548031.g21206.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
WD40_repeat_dom	ProSiteProfiles	WD40-repeat-containing domain
WD40_repeat_dom_sf	SUPERFAMILY	WD40-repeat-containing domain superfamily
WD40/YVTN_repeat-like_dom_sf	Gene3D	WD40/YVTN repeat-like-containing domain superfamily
G-protein_beta_WD-40_rep	PRINTS	G-protein beta WD-40 repeat
TIF_beta_prop-like	Pfam	Translation initiation factor, beta propellor-like domain
WD40_repeat	ProSiteProfiles	WD40 repeat
WD40_repeat	SMART	WD40 repeat
WD40_repeat_CS	ProSitePatterns	WD40 repeat, conserved site

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
chromatin binding	Hs	molecular function
DNA replication origin binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
chromosome	Hs	cellular component
nucleolus	Hs	cellular component
cytosol	Hs	cellular component
DNA replication	Hs	biological process
nucleosome assembly	Hs	biological process
nucleosome disassembly	Hs	biological process
macromolecular complex	Hs	cellular component
histone binding	Hs	molecular function

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	137	2.10e-37
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	137	2.10e-37
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	137	2.10e-37
chromatin binding	Hs	molecular function	382	4.64e-132
DNA replication origin binding	Hs	molecular function	382	4.64e-132
RNA binding	Hs	molecular function	382	4.64e-132
histone deacetylase activity	Hs	molecular function	137	2.10e-37
protein binding	Hs	molecular function	382	4.64e-132
nucleus	Hs	cellular component	382	4.64e-132
nucleoplasm	Hs	cellular component	137	2.10e-37
chromosome	Hs	cellular component	382	4.64e-132
nucleolus	Hs	cellular component	382	4.64e-132
cytosol	Hs	cellular component	382	4.64e-132
DNA-dependent ATPase activity	Hs	molecular function	137	2.10e-37
Sin3 complex	Hs	cellular component	137	2.10e-37
NuRD complex	Hs	cellular component	137	2.10e-37
NURF complex	Hs	cellular component	137	2.10e-37
nucleosomal DNA binding	Hs	molecular function	137	2.10e-37
macromolecular complex	Hs	cellular component	382	4.64e-132
CAF-1 complex	Hs	cellular component	137	2.10e-37
ESC/E(Z) complex	Hs	cellular component	137	2.10e-37
histone binding	Hs	molecular function	382	4.64e-132
histone deacetylase binding	Hs	molecular function	137	2.10e-37

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	3.5E-81