Aniseed - Gene card

Gene 'Moocci.CG.ELv1_2.S49...'

Gene Card

Best human hits

PKD1L2; PKD1L3; PKDREJ

Species

M.occidentalis

Unique Gene ID

Moocci.g00000018

Gene Model ID

Moocci.CG.ELv1_2.S4928.g00018

Location

S4928:5..893

Transcript Models and Sequences

Moocci.CG.ELv1_2.S4928.g00018.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
PLAT/LH2_dom	Pfam	PLAT/LH2 domain
PC1	PRINTS	Polycystic kidney disease type 1 protein
PLAT/LH2_dom_sf	SUPERFAMILY	PLAT/LH2 domain superfamily
PLAT/LH2_dom	ProSiteProfiles	PLAT/LH2 domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
kidney development	Hs	biological process
cation channel activity	Hs	molecular function
calcium channel activity	Hs	molecular function
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
plasma membrane	Hs	cellular component
ion transport	Hs	biological process
cation transport	Hs	biological process
calcium ion transport	Hs	biological process
cation transmembrane transporter activity	Hs	molecular function
cell surface	Hs	cellular component
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
carbohydrate binding	Hs	molecular function
sour taste receptor activity	Hs	molecular function
cation channel complex	Hs	cellular component
receptor complex	Hs	cellular component
detection of mechanical stimulus	Hs	biological process
extracellular exosome	Hs	cellular component
calcium ion transmembrane transport	Hs	biological process
cellular response to acidic pH	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
cation channel activity	Hs	molecular function	110	1.17e-27
calcium channel activity	Hs	molecular function	140	5.37e-38
calcium ion binding	Hs	molecular function	140	5.37e-38
protein binding	Hs	molecular function	121	2.04e-31
plasma membrane	Hs	cellular component	110	1.17e-27
cation transmembrane transporter activity	Hs	molecular function	110	1.17e-27
cell surface	Hs	cellular component	110	1.17e-27
membrane	Hs	cellular component	140	5.37e-38
integral component of membrane	Hs	cellular component	140	5.37e-38
carbohydrate binding	Hs	molecular function	140	5.37e-38
sour taste receptor activity	Hs	molecular function	110	1.17e-27
cation channel complex	Hs	cellular component	110	1.17e-27
receptor complex	Hs	cellular component	110	1.17e-27
extracellular exosome	Hs	cellular component	110	1.17e-27

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
kidney development	PRINTS	biological process	7.5E-5
protein binding	SUPERFAMILY	molecular function	2.72E-16
integral component of membrane	PRINTS	cellular component	7.5E-5