Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily
Fork_head_dom	ProSiteProfiles	Fork head domain
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
Fork_head_dom	Pfam	Fork head domain
Fork_head_dom	SMART	Fork head domain
TF_fork_head_CS_2	ProSitePatterns	Fork head domain conserved site 2
Fork_head_dom	PRINTS	Fork head domain
Fork_head_dom	CDD	Fork head domain

GOSlim

17 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Blast	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
cell differentiation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
DNA binding, bending	Hs	molecular function
anatomical structure morphogenesis	Hs	biological process
cell differentiation	Hs	biological process
sequence-specific DNA binding	Hs	molecular function

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	206	1.80e-58
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	206	1.80e-58
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	189	3.31e-52
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	206	1.80e-58
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	189	3.31e-52
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	206	1.80e-58
DNA binding	Hs	molecular function	206	1.80e-58
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	206	1.80e-58
protein binding	Hs	molecular function	206	1.80e-58
nucleus	Hs	cellular component	206	1.80e-58
nucleoplasm	Hs	cellular component	206	1.80e-58
DNA binding, bending	Hs	molecular function	204	6.93e-58
sequence-specific DNA binding	Hs	molecular function	206	1.80e-58

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	SMART	molecular function	4.8E-60
regulation of transcription, DNA-templated	SMART	biological process	4.8E-60
sequence-specific DNA binding	SMART	molecular function	4.8E-60

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