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GENE CARD

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  1. Gene 'Harore.CG.MTP2014.S2...'

Gene Card

Best human hits

USH2A

Species

H.roretzi

Unique Gene ID

Harore.g00012005

Gene Model ID

Harore.CG.MTP2014.S271.g12005

Location

S271:102520..108520

Transcript Models and Sequences

  Harore.CG.MTP2014.S271.g12005.01.t

External Database Gene Card

External database links

No result

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

No result

IPR Term Analysis Definition

GOSlim

22 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
cytoplasm Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
protein homodimerization activity Blast molecular function
cell projection Blast cellular component
neuron part Blast cellular component
neuron projection Blast cellular component
cluster of actin-based cell projections Blast cellular component
macromolecular complex Blast cellular component
macromolecular complex binding Blast molecular function
extracellular region part Blast cellular component
cytoskeletal protein binding Blast molecular function
organelle part Blast cellular component
cell projection part Blast cellular component
plasma membrane region Blast cellular component
microtubule organizing center Blast cellular component
cell projection membrane Blast cellular component
cell leading edge Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
photoreceptor inner segment Hs cellular component 45.4 1.09e-04
stereocilia ankle link Hs cellular component 45.4 1.09e-04
stereocilia ankle link complex Hs cellular component 45.4 1.09e-04
protein binding Hs molecular function 45.4 1.09e-04
collagen binding Hs molecular function 45.4 1.09e-04
extracellular region Hs cellular component 45.4 1.09e-04
basement membrane Hs cellular component 45.4 1.09e-04
cytoplasm Hs cellular component 45.4 1.09e-04
plasma membrane Hs cellular component 45.4 1.09e-04
membrane Hs cellular component 45.4 1.09e-04
integral component of membrane Hs cellular component 45.4 1.09e-04
apical plasma membrane Hs cellular component 45.4 1.09e-04
myosin binding Hs molecular function 45.4 1.09e-04
photoreceptor connecting cilium Hs cellular component 45.4 1.09e-04
stereocilium bundle Hs cellular component 45.4 1.09e-04
ciliary basal body Hs cellular component 45.4 1.09e-04
protein homodimerization activity Hs molecular function 45.4 1.09e-04
cell projection Hs cellular component 45.4 1.09e-04
stereocilium membrane Hs cellular component 45.4 1.09e-04
periciliary membrane compartment Hs cellular component 45.4 1.09e-04
USH2 complex Hs cellular component 45.4 1.09e-04

GO (InterProScan)

No result

GO Term Analysis Type e-value