Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 

Gene Card

Best human hits

OGFOD2; PLOD1; PLOD3

Species

H.roretzi

Unique Gene ID

Harore.g00010293

Gene Model ID

Harore.CG.MTP2014.S242.g10293

Location

S242:70765..73700

Transcript Models and Sequences

  Harore.CG.MTP2014.S242.g10293.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Pro_4_hyd_alph SMART Prolyl 4-hydroxylase, alpha subunit
Oxoglu/Fe-dep_dioxygenase ProSiteProfiles Oxoglutarate/iron-dependent dioxygenase

GOSlim

19 results

GO Term Annotation Origin Type
iron ion binding Orthology molecular function
protein binding Blast molecular function
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
Golgi apparatus Blast cellular component
membrane Blast cellular component
protein homodimerization activity Blast molecular function
metal ion binding Orthology molecular function
oxidation-reduction process Orthology biological process
extracellular exosome Blast cellular component
catalytic activity Orthology molecular function
small molecule binding Orthology molecular function
anion binding Orthology molecular function
coenzyme binding Orthology molecular function
Golgi apparatus part Blast cellular component
bounding membrane of organelle Blast cellular component
extracellular region part Blast cellular component
transferase activity Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
iron ion binding Hs molecular function
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function
L-ascorbic acid binding Hs molecular function
metal ion binding Hs molecular function
dioxygenase activity Hs molecular function
oxidation-reduction process Hs biological process

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
iron ion binding Hs molecular function 306 8.05e-103
protein binding Hs molecular function 55.5 2.20e-08
endoplasmic reticulum Hs cellular component 55.5 2.20e-08
endoplasmic reticulum membrane Hs cellular component 55.5 2.20e-08
Golgi apparatus Hs cellular component 55.5 2.20e-08
trans-Golgi network Hs cellular component 55.5 2.20e-08
procollagen-lysine 5-dioxygenase activity Hs molecular function 55.5 2.20e-08
membrane Hs cellular component 55.5 2.20e-08
oxidoreductase activity Hs molecular function 306 8.05e-103
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function 306 8.05e-103
rough endoplasmic reticulum membrane Hs cellular component 55.5 2.20e-08
extracellular matrix Hs cellular component 55.5 2.20e-08
L-ascorbic acid binding Hs molecular function 306 8.05e-103
procollagen glucosyltransferase activity Hs molecular function 55.5 2.20e-08
protein homodimerization activity Hs molecular function 54.3 5.50e-08
metal ion binding Hs molecular function 306 8.05e-103
procollagen galactosyltransferase activity Hs molecular function 55.5 2.20e-08
dioxygenase activity Hs molecular function 306 8.05e-103
extracellular exosome Hs cellular component 55.5 2.20e-08
catalytic complex Hs cellular component 54.3 5.50e-08

GO (InterProScan)

5 results

GO Term Analysis Type e-value
iron ion binding SMART molecular function 9.3E-5
oxidoreductase activity ProSiteProfiles molecular function 9.988
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen SMART molecular function 9.3E-5
L-ascorbic acid binding SMART molecular function 9.3E-5
oxidation-reduction process SMART biological process 9.3E-5

Back to Top