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GENE CARD

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Gene Card

Best human hits

MESP1; PTF1A; TCF21

Species

H.roretzi

Unique Gene ID

Harore.g00006901

Gene Model ID

Harore.CG.MTP2014.S97.g06901

Location

S97:179264..179912

Transcript Models and Sequences

  Harore.CG.MTP2014.S97.g06901.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
HLH_DNA-bd_sf Gene3D Helix-loop-helix DNA-binding domain superfamily
bHLH_dom CDD Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom SMART Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf SUPERFAMILY Helix-loop-helix DNA-binding domain superfamily
bHLH_dom Pfam Myc-type, basic helix-loop-helix (bHLH) domain

GOSlim

17 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
cytoplasm Blast cellular component
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
protein dimerization activity Blast molecular function
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
intracellular part Blast cellular component
macromolecular complex Blast cellular component
enzyme binding Blast molecular function
transcription factor binding Blast molecular function
receptor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 56.2 1.51e-09
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 53.5 1.41e-08
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 56.2 1.51e-09
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 56.2 1.51e-09
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 53.5 5.62e-09
DNA binding Hs molecular function 56.2 1.51e-09
chromatin binding Hs molecular function 53.5 1.41e-08
transcription factor activity, sequence-specific DNA binding Hs molecular function 56.2 1.51e-09
intracellular Hs cellular component 53.5 1.41e-08
nucleus Hs cellular component 56.2 1.51e-09
transcription factor complex Hs cellular component 53.5 1.41e-08
cytoplasm Hs cellular component 53.5 1.41e-08
enhancer binding Hs molecular function 56.2 1.51e-09
histone deacetylase binding Hs molecular function 53.5 5.62e-09
bHLH transcription factor binding Hs molecular function 53.5 5.62e-09
sequence-specific DNA binding Hs molecular function 53.5 1.41e-08
transcription regulatory region DNA binding Hs molecular function 56.2 1.51e-09
protein dimerization activity Hs molecular function 56.2 1.51e-09
androgen receptor binding Hs molecular function 53.5 5.62e-09
E-box binding Hs molecular function 53.5 5.62e-09

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein dimerization activity Gene3D molecular function 1.0E-15