- Gene 'Harore.CG.MTP2014.S5...'
Gene Card
Best human hits
PABPC1; PABPC3; PABPC4
Species
Unique Gene ID
Harore.g00006335
Gene Model ID
Harore.CG.MTP2014.S52.g06335
Location
S52:0..1903
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| PABP-dom | SUPERFAMILY | PABC (PABP) domain |
| PABP_HYD | ProSiteProfiles | Polyadenylate-binding protein/Hyperplastic disc protein |
| RRM_dom | Pfam | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| PABP_HYD | SMART | Polyadenylate-binding protein/Hyperplastic disc protein |
| RRM_dom | SMART | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| PABP_HYD | Pfam | Polyadenylate-binding protein/Hyperplastic disc protein |
GOSlim
15 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytosol | Blast | cellular component |
| focal adhesion | Blast | cellular component |
| protein C-terminus binding | Blast | molecular function |
| membrane | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| nuclear part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| positive regulation of gene expression | Blast | biological process |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 359 | 1.11e-116 |
| RNA binding | Hs | molecular function | 359 | 1.11e-116 |
| mRNA binding | Hs | molecular function | 359 | 1.11e-116 |
| mRNA 3'-UTR binding | Hs | molecular function | 345 | 1.59e-111 |
| protein binding | Hs | molecular function | 359 | 1.11e-116 |
| nucleus | Hs | cellular component | 359 | 1.11e-116 |
| spliceosomal complex | Hs | cellular component | 345 | 1.59e-111 |
| cytoplasm | Hs | cellular component | 359 | 1.11e-116 |
| cytosol | Hs | cellular component | 359 | 1.11e-116 |
| focal adhesion | Hs | cellular component | 345 | 1.59e-111 |
| protein C-terminus binding | Hs | molecular function | 345 | 1.59e-111 |
| poly(A) binding | Hs | molecular function | 359 | 1.11e-116 |
| poly(U) RNA binding | Hs | molecular function | 359 | 1.11e-116 |
| translation activator activity | Hs | molecular function | 345 | 1.59e-111 |
| cytoplasmic stress granule | Hs | cellular component | 359 | 1.11e-116 |
| membrane | Hs | cellular component | 345 | 1.59e-111 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 359 | 1.11e-116 |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component | 345 | 1.59e-111 |
| extracellular exosome | Hs | cellular component | 345 | 1.59e-111 |
| catalytic step 2 spliceosome | Hs | cellular component | 345 | 1.59e-111 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 2.82E-27 |
| RNA binding | SUPERFAMILY | molecular function | 6.8E-43 |
