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Gene Card

Best human hits

SRP72

Species

H.roretzi

Unique Gene ID

Harore.g00004169

Gene Model ID

Harore.CG.MTP2014.S1059.g04169

Location

S1059:3628..10713

Transcript Models and Sequences

  Harore.CG.MTP2014.S1059.g04169.01.t

External Database Gene Card

External database links

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WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily
TPR_repeat ProSiteProfiles Tetratricopeptide repeat
SRP72 PANTHER Signal recognition particle, SRP72 subunit
Signal_recog_part_SRP72_RNA-bd Pfam Signal recognition particle, SRP72 subunit, RNA-binding
TPR-like_helical_dom_sf SUPERFAMILY Tetratricopeptide-like helical domain superfamily
SRP_TPR-like Pfam Putative TPR-like repeat
TPR-contain_dom ProSiteProfiles Tetratricopeptide repeat-containing domain
TPR_repeat SMART Tetratricopeptide repeat
TPR_repeat Pfam Tetratricopeptide repeat

GOSlim

11 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Orthology molecular function
intracellular Orthology cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
cytosol Orthology cellular component
SRP-dependent cotranslational protein targeting to membrane Orthology biological process
macromolecular complex binding Orthology molecular function
cytoplasmic part Orthology cellular component
macromolecular complex Orthology cellular component
transmembrane transport Orthology biological process

GO (Orthology)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA binding Hs molecular function
signal recognition particle binding Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
signal recognition particle, endoplasmic reticulum targeting Hs cellular component
cytosol Hs cellular component
SRP-dependent cotranslational protein targeting to membrane Hs biological process
SRP-dependent cotranslational protein targeting to membrane, translocation Hs biological process
7S RNA binding Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
TPR domain binding Hs molecular function
response to drug Hs biological process
ribosome binding Hs molecular function
signal recognition particle Hs cellular component

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA binding Hs molecular function 457 5.10e-151
signal recognition particle binding Hs molecular function 457 5.10e-151
protein binding Hs molecular function 457 5.10e-151
intracellular Hs cellular component 457 5.10e-151
cytoplasm Hs cellular component 457 5.10e-151
endoplasmic reticulum Hs cellular component 457 5.10e-151
signal recognition particle, endoplasmic reticulum targeting Hs cellular component 457 5.10e-151
cytosol Hs cellular component 457 5.10e-151
7S RNA binding Hs molecular function 457 5.10e-151
intracellular ribonucleoprotein complex Hs cellular component 457 5.10e-151
TPR domain binding Hs molecular function 457 5.10e-151
ribosome binding Hs molecular function 457 5.10e-151
signal recognition particle Hs cellular component 457 5.10e-151

GO (InterProScan)

4 results

GO Term Analysis Type e-value
protein binding Gene3D molecular function 2.5E-45
SRP-dependent cotranslational protein targeting to membrane PANTHER biological process 7.4E-189
7S RNA binding Pfam molecular function 3.5E-12
signal recognition particle Pfam cellular component 3.5E-12

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