Login
Help

GENE CARD

Submit your Data

  1. Gene 'Cisavi.CG.ENS81.R23....'
  2. Gene 'Harore.CG.MTP2014.S1...'

Gene Card

Best human hits

ATAD5; CHTF18; RFC1

Species

H.roretzi

Unique Gene ID

Harore.g00002375

Gene Model ID

Harore.CG.MTP2014.S196.g02375

Location

S196:54279..72948

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
AAA+_ATPase SMART AAA+ ATPase domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
ATPase_AAA_core Pfam ATPase, AAA-type, core

GOSlim

20 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
DNA binding Orthology molecular function
double-stranded DNA binding Blast molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
cytosol Orthology cellular component
DNA replication Orthology biological process
cell cycle Orthology biological process
enzyme activator activity Blast molecular function
membrane Orthology cellular component
sequence-specific DNA binding Blast molecular function
extracellular exosome Blast cellular component
nucleoside-triphosphatase activity Orthology molecular function
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
DNA binding Hs molecular function
DNA clamp loader activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytosol Hs cellular component
DNA replication Hs biological process
cell cycle Hs biological process
membrane Hs cellular component
Ctf18 RFC-like complex Hs cellular component
single-stranded DNA-dependent ATPase activity Hs molecular function

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 548 7.10e-178
DNA binding Hs molecular function 548 7.10e-178
DNA clamp loader activity Hs molecular function 548 7.10e-178
double-stranded DNA binding Hs molecular function 105 5.83e-23
protein binding Hs molecular function 548 7.10e-178
ATP binding Hs molecular function 548 7.10e-178
nucleus Hs cellular component 548 7.10e-178
nucleoplasm Hs cellular component 548 7.10e-178
DNA replication factor C complex Hs cellular component 105 5.83e-23
nucleolus Hs cellular component 105 5.83e-23
cytoplasm Hs cellular component 105 5.83e-23
cytosol Hs cellular component 548 7.10e-178
enzyme activator activity Hs molecular function 105 5.83e-23
membrane Hs cellular component 548 7.10e-178
protein domain specific binding Hs molecular function 105 5.83e-23
Ctf18 RFC-like complex Hs cellular component 548 7.10e-178
single-stranded DNA-dependent ATPase activity Hs molecular function 548 7.10e-178
sequence-specific DNA binding Hs molecular function 105 5.83e-23
extracellular exosome Hs cellular component 105 5.83e-23

GO (InterProScan)

1 result

GO Term Analysis Type e-value
ATP binding Pfam molecular function 6.6E-14