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Gene Card

Best human hits

NSMCE1

Species

H.roretzi

Unique Gene ID

Harore.g00001709

Gene Model ID

Harore.CG.MTP2014.S46.g01709

Location

S46:99497..101470

Transcript Models and Sequences

  Harore.CG.MTP2014.S46.g01709.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Nse1 Pfam Non-structural maintenance of chromosomes element 1
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Nse1 PANTHER Non-structural maintenance of chromosomes element 1
Znf_RING-like Pfam Zinc finger, RING-like
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Znf_RING-like CDD Zinc finger, RING-like

GOSlim

29 results

GO Term Annotation Origin Type
ubiquitin-protein transferase activity Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
DNA repair InterProScan biological process
transferase activity Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Blast molecular function
protein dimerization activity Blast molecular function
nucleotide binding Orthology molecular function
mRNA splicing, via spliceosome Orthology biological process
DNA binding Orthology molecular function
ATP binding Orthology molecular function
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
transcription initiation from RNA polymerase II promoter Orthology biological process
microtubule cytoskeleton Orthology cellular component
RNA metabolic process Orthology biological process
hydrolase activity Orthology molecular function
nucleoside-triphosphatase activity Orthology molecular function
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
mRNA processing Orthology biological process
cell surface receptor signaling pathway Orthology biological process
cellular response to organic substance Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleotide binding Hs molecular function
mRNA splicing, via spliceosome Hs biological process
transcription factor activity, core RNA polymerase II binding Hs molecular function
DNA binding Hs molecular function
helicase activity Hs molecular function
ATP binding Hs molecular function
transcription factor TFIIF complex Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
transcription elongation from RNA polymerase II promoter Hs biological process
7-methylguanosine mRNA capping Hs biological process
fibroblast growth factor receptor signaling pathway Hs biological process
microtubule cytoskeleton Hs cellular component
RNA metabolic process Hs biological process
hydrolase activity Hs molecular function
positive regulation of transcription elongation from RNA polymerase II promoter Hs biological process
snRNA transcription from RNA polymerase II promoter Hs biological process
positive regulation of transcription initiation from RNA polymerase II promoter Hs biological process
transcriptional preinitiation complex Hs cellular component

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
chromosome, telomeric region Hs cellular component 160 8.72e-47
ubiquitin-protein transferase activity Hs molecular function 160 8.72e-47
protein binding Hs molecular function 160 8.72e-47
nucleus Hs cellular component 160 8.72e-47
nucleoplasm Hs cellular component 160 8.72e-47
chromosome Hs cellular component 160 8.72e-47
transferase activity Hs molecular function 160 8.72e-47
Smc5-Smc6 complex Hs cellular component 160 8.72e-47
intracellular membrane-bounded organelle Hs cellular component 160 8.72e-47
metal ion binding Hs molecular function 160 8.72e-47
protein dimerization activity Hs molecular function 160 8.72e-47

GO (InterProScan)

2 results

GO Term Analysis Type e-value
DNA repair PANTHER biological process 2.3E-64
Smc5-Smc6 complex PANTHER cellular component 2.3E-64

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