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GENE CARD

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Gene Card

Best human hits

SNW1

Species

H.roretzi

Unique Gene ID

Harore.g00000088

Gene Model ID

Harore.CG.MTP2014.S244.g00088

Location

S244:56703..65821

Transcript Models and Sequences

  Harore.CG.MTP2014.S244.g00088.01.t
Harore.CG.MTP2014.S244.g00088.02.t

External Database Gene Card

External database links

No result

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
SKI-int_prot_SKIP PANTHER SKI-interacting protein, SKIP
SKI-int_prot_SKIP_SNW-dom Pfam SKI-interacting protein SKIP, SNW domain

GOSlim

44 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
mRNA splicing, via spliceosome Orthology biological process
transcription coactivator activity Orthology molecular function
transcription corepressor activity Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
transcription initiation from RNA polymerase II promoter Orthology biological process
mRNA processing Orthology biological process
Notch signaling pathway Orthology biological process
RNA splicing Orthology biological process
nuclear body Orthology cellular component
nuclear speck Orthology cellular component
enzyme binding Orthology molecular function
negative regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
receptor binding Orthology molecular function
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component
nucleoplasm part Orthology cellular component
nuclear lumen Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
positive regulation of signal transduction Orthology biological process
cellular response to organic substance Orthology biological process
transcription factor binding Orthology molecular function
intracellular signal transduction Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
apoptotic process Orthology biological process
positive regulation of gene expression Orthology biological process
signal transduction Orthology biological process
regulation of signal transduction Orthology biological process
cell development Orthology biological process
generation of neurons Orthology biological process
organelle organization Orthology biological process
cellular protein modification process Orthology biological process
intracellular Orthology cellular component
response to lipid Orthology biological process

GO (Orthology)

47 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
generation of catalytic spliceosome for second transesterification step Hs biological process
mRNA splicing, via spliceosome Hs biological process
chromatin Hs cellular component
transcription coactivator activity Hs molecular function
transcription corepressor activity Hs molecular function
RNA binding Hs molecular function
Notch binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
mRNA processing Hs biological process
Notch signaling pathway Hs biological process
positive regulation of transcription of Notch receptor target Hs biological process
cyclin/CDK positive transcription elongation factor complex Hs cellular component
RNA splicing Hs biological process
viral process Hs biological process
nuclear matrix Hs cellular component
nuclear body Hs cellular component
nuclear speck Hs cellular component
enzyme binding Hs molecular function
positive regulation of transforming growth factor beta receptor signaling pathway Hs biological process
nuclear hormone receptor binding Hs molecular function
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator Hs biological process
vitamin D receptor binding Hs molecular function
retinoic acid receptor binding Hs molecular function
positive regulation of Notch signaling pathway Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
SMAD binding Hs molecular function
positive regulation of mRNA splicing, via spliceosome Hs biological process
retinoic acid receptor signaling pathway Hs biological process
regulation of retinoic acid receptor signaling pathway Hs biological process
androgen receptor binding Hs molecular function
positive regulation of neurogenesis Hs biological process
positive regulation of histone H3-K4 methylation Hs biological process
U2-type catalytic step 2 spliceosome Hs cellular component
catalytic step 2 spliceosome Hs cellular component
post-mRNA release spliceosomal complex Hs cellular component
SMAD protein complex Hs cellular component
cellular response to retinoic acid Hs biological process

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
chromatin Hs cellular component 629 0.0
transcription coactivator activity Hs molecular function 629 0.0
transcription corepressor activity Hs molecular function 629 0.0
RNA binding Hs molecular function 629 0.0
Notch binding Hs molecular function 629 0.0
protein binding Hs molecular function 629 0.0
nucleus Hs cellular component 629 0.0
nucleoplasm Hs cellular component 629 0.0
spliceosomal complex Hs cellular component 629 0.0
cytoplasm Hs cellular component 629 0.0
cyclin/CDK positive transcription elongation factor complex Hs cellular component 629 0.0
nuclear matrix Hs cellular component 629 0.0
nuclear body Hs cellular component 629 0.0
nuclear speck Hs cellular component 629 0.0
enzyme binding Hs molecular function 629 0.0
nuclear hormone receptor binding Hs molecular function 629 0.0
vitamin D receptor binding Hs molecular function 629 0.0
retinoic acid receptor binding Hs molecular function 629 0.0
SMAD binding Hs molecular function 629 0.0
androgen receptor binding Hs molecular function 629 0.0
U2-type catalytic step 2 spliceosome Hs cellular component 629 0.0
catalytic step 2 spliceosome Hs cellular component 629 0.0
post-mRNA release spliceosomal complex Hs cellular component 629 0.0
SMAD protein complex Hs cellular component 629 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
mRNA splicing, via spliceosome PANTHER biological process 2.6E-235
spliceosomal complex PANTHER cellular component 2.6E-235

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