Gene Card
Best human hits
NCL; PABPC5; SART3
Species
Unique Gene ID
Haaura.g00002899
Gene Model ID
Haaura.CG.MTP2014.S166.g02899
Location
S166:74843..82812
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | Pfam | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| TPR-like_helical_dom_sf | SUPERFAMILY | Tetratricopeptide-like helical domain superfamily |
| RRM_dom | SMART | RNA recognition motif domain |
| SART3_RRM1 | CDD | SART3, RNA recognition motif 1 |
| TPR-like_helical_dom_sf | Gene3D | Tetratricopeptide-like helical domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| HAT | SMART | HAT (Half-A-TPR) repeat |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
26 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| spliceosomal tri-snRNP complex assembly | Hs | biological process |
| spliceosomal snRNP assembly | Hs | biological process |
| mRNA splicing, via spliceosome | Hs | biological process |
| cell morphogenesis | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| U6atac snRNP | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| nucleosome assembly | Hs | biological process |
| RNA processing | Hs | biological process |
| mRNA processing | Hs | biological process |
| RNA splicing | Hs | biological process |
| regulation of gene expression | Hs | biological process |
| Cajal body | Hs | cellular component |
| nuclear speck | Hs | cellular component |
| U6 snRNA binding | Hs | molecular function |
| U4 snRNA binding | Hs | molecular function |
| U6atac snRNA binding | Hs | molecular function |
| histone binding | Hs | molecular function |
| U4/U6 snRNP | Hs | cellular component |
| hematopoietic stem cell proliferation | Hs | biological process |
| positive regulation of histone deubiquitination | Hs | biological process |
| ubiquitin-specific protease binding | Hs | molecular function |
GO (Blast)
29 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 597 | 0.0 |
| DNA binding | Hs | molecular function | 71.6 | 1.31e-12 |
| RNA binding | Hs | molecular function | 597 | 0.0 |
| protein binding | Hs | molecular function | 597 | 0.0 |
| nucleus | Hs | cellular component | 597 | 0.0 |
| nucleoplasm | Hs | cellular component | 597 | 0.0 |
| U6atac snRNP | Hs | cellular component | 597 | 0.0 |
| nucleolus | Hs | cellular component | 71.6 | 1.31e-12 |
| cytoplasm | Hs | cellular component | 597 | 0.0 |
| mitochondrion | Hs | cellular component | 68.9 | 4.01e-12 |
| mitochondrial matrix | Hs | cellular component | 68.9 | 4.01e-12 |
| cell cortex | Hs | cellular component | 71.6 | 1.31e-12 |
| protein C-terminus binding | Hs | molecular function | 71.6 | 1.31e-12 |
| Cajal body | Hs | cellular component | 597 | 0.0 |
| membrane | Hs | cellular component | 71.6 | 1.31e-12 |
| nuclear speck | Hs | cellular component | 597 | 0.0 |
| U6 snRNA binding | Hs | molecular function | 597 | 0.0 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 71.6 | 1.31e-12 |
| U4 snRNA binding | Hs | molecular function | 597 | 0.0 |
| U6atac snRNA binding | Hs | molecular function | 597 | 0.0 |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component | 71.6 | 1.31e-12 |
| telomeric DNA binding | Hs | molecular function | 71.6 | 1.31e-12 |
| histone binding | Hs | molecular function | 597 | 0.0 |
| identical protein binding | Hs | molecular function | 71.6 | 1.31e-12 |
| DNA topoisomerase binding | Hs | molecular function | 71.6 | 1.31e-12 |
| mRNA 5'-UTR binding | Hs | molecular function | 71.6 | 1.31e-12 |
| extracellular exosome | Hs | cellular component | 71.6 | 1.31e-12 |
| U4/U6 snRNP | Hs | cellular component | 597 | 0.0 |
| ubiquitin-specific protease binding | Hs | molecular function | 597 | 0.0 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 1.88E-25 |
| protein binding | SUPERFAMILY | molecular function | 4.55E-48 |
| RNA processing | SMART | biological process | 0.037 |
