Aniseed - Gene card

Gene 'Haaura.CG.MTP2014.S9...'

Gene Card

Best human hits

ZIC1; ZIC3; ZIC4

Species

H.aurantium

Unique Gene ID

Haaura.g00001999

Gene Model ID

Haaura.CG.MTP2014.S97.g01999

Location

S97:69747..71157

Transcript Models and Sequences

Haaura.CG.MTP2014.S97.g01999.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_type	SMART	Zinc finger C2H2-type
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
cell differentiation	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
kidney development	Hs	biological process
nuclear speck	Hs	cellular component
negative regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
transcription regulatory region DNA binding	Hs	molecular function
negative regulation of smoothened signaling pathway	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
non-motile cilium	Hs	cellular component
positive regulation of protein localization to nucleus	Hs	biological process

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	254	1.25e-79
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	254	1.25e-79
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	241	1.15e-74
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	254	1.25e-79
nucleic acid binding	Hs	molecular function	254	1.25e-79
DNA binding	Hs	molecular function	254	1.25e-79
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	254	1.25e-79
protein binding	Hs	molecular function	254	1.25e-79
nucleus	Hs	cellular component	254	1.25e-79
nucleoplasm	Hs	cellular component	254	1.25e-79
cytoplasm	Hs	cellular component	254	1.25e-79
sequence-specific DNA binding	Hs	molecular function	254	1.25e-79
metal ion binding	Hs	molecular function	254	1.25e-79

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	2.8E-4