Aniseed - Gene card

Gene Card

Best human hits

FARP1; FARP2; FRMD7

Species

C.savignyi

Unique Gene ID

Cisavi.g00010208

Gene Model ID

Cisavi.CG.ENS81.R7.2405834-2430809

Location

R7:2405833..2430809

Transcript Models and Sequences

Cisavi.CG.ENS81.R7.2405834-2430809.12758.t
Cisavi.CG.ENS81.R7.2405834-2430809.12759.t
Cisavi.CG.ENS81.R7.2405834-2430809.12760.t
Cisavi.CG.ENS81.R7.2405834-2430809.12761.t
Cisavi.CG.ENS81.R7.2405834-2430809.12762.t
Cisavi.CG.ENS81.R7.2405834-2430809.12763.t
Cisavi.CG.ENS81.R7.2405834-2430809.12764.t
Cisavi.CG.ENS81.R7.2405834-2430809.12765.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

23 results

IPR Term	Analysis	Definition
DH-domain	CDD	Dbl homology (DH) domain
FERM_PH-like_C	Pfam	FERM, C-terminal PH-like domain
PH-like_dom_sf	Gene3D	PH-like domain superfamily
FERM-adjacent	Pfam	FERM adjacent (FA)
DH-domain	ProSiteProfiles	Dbl homology (DH) domain
DBL_dom_sf	SUPERFAMILY	Dbl homology (DH) domain superfamily
PH_domain	Pfam	Pleckstrin homology domain
PH_domain	ProSiteProfiles	Pleckstrin homology domain
FERM_domain	ProSiteProfiles	FERM domain
Band_41_domain	SMART	Band 4.1 domain
FERM_2	SUPERFAMILY	FERM superfamily, second domain
FERM-adjacent	SMART	FERM adjacent (FA)
PH_domain	SMART	Pleckstrin homology domain
FERM_central	CDD	FERM central domain
DBL_dom_sf	Gene3D	Dbl homology (DH) domain superfamily
DH-domain	Pfam	Dbl homology (DH) domain
Ubiquitin-like_domsf	SUPERFAMILY	Ubiquitin-like domain superfamily
Band_41_domain	PRINTS	Band 4.1 domain
FERM_N	Pfam	FERM, N-terminal
FERM_central	Pfam	FERM central domain
DH-domain	SMART	Dbl homology (DH) domain
FERM/acyl-CoA-bd_prot_sf	Gene3D	FERM/acyl-CoA-binding protein superfamily
FERM_PH-like_C	SMART	FERM, C-terminal PH-like domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
guanyl-nucleotide exchange factor activity	Hs	molecular function	825	0.0
Rho guanyl-nucleotide exchange factor activity	Hs	molecular function	825	0.0
extracellular space	Hs	cellular component	296	1.12e-87
cytoplasm	Hs	cellular component	825	0.0
cytosol	Hs	cellular component	825	0.0
cytoskeleton	Hs	cellular component	825	0.0
plasma membrane	Hs	cellular component	756	0.0
cytoskeletal protein binding	Hs	molecular function	825	0.0
membrane	Hs	cellular component	756	0.0
cell junction	Hs	cellular component	756	0.0
filopodium	Hs	cellular component	756	0.0
dendrite	Hs	cellular component	756	0.0
growth cone	Hs	cellular component	296	1.12e-87
Rac guanyl-nucleotide exchange factor activity	Hs	molecular function	825	0.0
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component	756	0.0
cell projection	Hs	cellular component	756	0.0
neuron projection	Hs	cellular component	756	0.0
neuronal cell body	Hs	cellular component	296	1.12e-87
dendritic spine	Hs	cellular component	756	0.0
synapse	Hs	cellular component	756	0.0
Rac GTPase binding	Hs	molecular function	756	0.0

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
Rho guanyl-nucleotide exchange factor activity	CDD	molecular function	1.44246E-30
cytoskeleton	ProSiteProfiles	cellular component	60.317
regulation of Rho protein signal transduction	CDD	biological process	1.44246E-30