Aniseed - Gene card

Gene Card

Best human hits

LRWD1; TBL1XR1; WDR5B

Species

C.savignyi

Unique Gene ID

Cisavi.g00010113

Gene Model ID

Cisavi.CG.ENS81.R7.1659966-1661579

Location

R7:1659965..1661579

Transcript Models and Sequences

Cisavi.CG.ENS81.R7.1659966-1661579.08722.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
WD40_repeat	SMART	WD40 repeat
WD40_repeat_dom_sf	SUPERFAMILY	WD40-repeat-containing domain superfamily
WD40/YVTN_repeat-like_dom_sf	Gene3D	WD40/YVTN repeat-like-containing domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
chromosome, centromeric region	Hs	cellular component
kinetochore	Hs	cellular component
condensed chromosome kinetochore	Hs	cellular component
chromosome, telomeric region	Hs	cellular component
chromatin binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nuclear origin of replication recognition complex	Hs	cellular component
chromosome	Hs	cellular component
pericentric heterochromatin	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
microtubule organizing center	Hs	cellular component
cytoskeleton	Hs	cellular component
DNA replication	Hs	biological process
DNA replication initiation	Hs	biological process
chromatin organization	Hs	biological process
methyl-CpG binding	Hs	molecular function
telomeric heterochromatin	Hs	cellular component
methylated histone binding	Hs	molecular function
intracellular membrane-bounded organelle	Hs	cellular component
establishment of protein localization to chromatin	Hs	biological process

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone deacetylase complex	Hs	cellular component	41.2	2.67e-04
chromosome, centromeric region	Hs	cellular component	125	2.94e-33
kinetochore	Hs	cellular component	125	2.94e-33
condensed chromosome kinetochore	Hs	cellular component	125	2.94e-33
chromosome, telomeric region	Hs	cellular component	125	2.94e-33
DNA binding	Hs	molecular function	41.2	2.67e-04
chromatin binding	Hs	molecular function	125	2.94e-33
transcription corepressor activity	Hs	molecular function	41.2	2.67e-04
protein binding	Hs	molecular function	125	2.94e-33
nucleus	Hs	cellular component	125	2.94e-33
nucleoplasm	Hs	cellular component	41.2	2.67e-04
nuclear origin of replication recognition complex	Hs	cellular component	125	2.94e-33
chromosome	Hs	cellular component	125	2.94e-33
pericentric heterochromatin	Hs	cellular component	125	2.94e-33
nucleolus	Hs	cellular component	125	2.94e-33
cytoplasm	Hs	cellular component	125	2.94e-33
microtubule organizing center	Hs	cellular component	125	2.94e-33
cytoskeleton	Hs	cellular component	125	2.94e-33
spindle microtubule	Hs	cellular component	41.2	2.67e-04
beta-catenin binding	Hs	molecular function	41.2	2.67e-04
methyl-CpG binding	Hs	molecular function	125	2.94e-33
transcriptional repressor complex	Hs	cellular component	41.2	2.67e-04
telomeric heterochromatin	Hs	cellular component	125	2.94e-33
methylated histone binding	Hs	molecular function	125	2.94e-33
ciliary basal body	Hs	cellular component	37.0	0.007
histone binding	Hs	molecular function	41.2	2.67e-04
intracellular membrane-bounded organelle	Hs	cellular component	125	2.94e-33
transcription regulatory region DNA binding	Hs	molecular function	41.2	2.67e-04
protein N-terminus binding	Hs	molecular function	41.2	2.67e-04

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	1.1E-24