Aniseed - Gene card

Gene Card

Best human hits

FBN1; FBN2; MATN2

Species

C.savignyi

Unique Gene ID

Cisavi.g00007567

Gene Model ID

Cisavi.CG.ENS81.R417.42473-63039

Location

R417:42472..63039

Transcript Models and Sequences

Cisavi.CG.ENS81.R417.42473-63039.01898.t
Cisavi.CG.ENS81.R417.42473-63039.01899.t
Cisavi.CG.ENS81.R417.42473-63039.01900.t
Cisavi.CG.ENS81.R417.42473-63039.01901.t
Cisavi.CG.ENS81.R417.42473-63039.01902.t
Cisavi.CG.ENS81.R417.42473-63039.01903.t
Cisavi.CG.ENS81.R417.42473-63039.01904.t
Cisavi.CG.ENS81.R417.42473-63039.01905.t
Cisavi.CG.ENS81.R417.42473-63039.01906.t
Cisavi.CG.ENS81.R417.42473-63039.01907.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

17 results

IPR Term	Analysis	Definition
cEGF	Pfam	Complement Clr-like EGF domain
EGF-like_Ca-bd_dom	Pfam	EGF-like calcium-binding domain
VWF_A	Pfam	von Willebrand factor, type A
VWF_A	SMART	von Willebrand factor, type A
EGF-like_dom	SMART	EGF-like domain
vWFA_dom_sf	SUPERFAMILY	von Willebrand factor A-like domain superfamily
EGF-like_dom	ProSiteProfiles	EGF-like domain
EGF-like_Ca-bd_dom	SMART	EGF-like calcium-binding domain
vWFA_dom_sf	Gene3D	von Willebrand factor A-like domain superfamily
EGF-like_CS	ProSitePatterns	EGF-like, conserved site
Growth_fac_rcpt_cys_sf	SUPERFAMILY	Growth factor receptor cysteine-rich domain superfamily
EGF_Ca-bd_CS	ProSitePatterns	EGF-like calcium-binding, conserved site
EGF-type_Asp/Asn_hydroxyl_site	ProSitePatterns	EGF-type aspartate/asparagine hydroxylation site
VWF_A	ProSiteProfiles	von Willebrand factor, type A
Sushi_SCR_CCP_dom	ProSiteProfiles	Sushi/SCR/CCP domain
Sushi/SCR/CCP_sf	SUPERFAMILY	Sushi/SCR/CCP superfamily
Sushi_SCR_CCP_dom	CDD	Sushi/SCR/CCP domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
microfibril	Hs	cellular component	239	1.35e-65
integrin binding	Hs	molecular function	230	1.71e-62
hormone activity	Hs	molecular function	230	1.71e-62
extracellular matrix structural constituent	Hs	molecular function	239	1.35e-65
calcium ion binding	Hs	molecular function	346	3.87e-105
protein binding	Hs	molecular function	346	3.87e-105
extracellular region	Hs	cellular component	346	3.87e-105
proteinaceous extracellular matrix	Hs	cellular component	346	3.87e-105
basement membrane	Hs	cellular component	346	3.87e-105
extracellular space	Hs	cellular component	346	3.87e-105
endoplasmic reticulum lumen	Hs	cellular component	230	1.71e-62
heparin binding	Hs	molecular function	230	1.71e-62
extracellular matrix constituent conferring elasticity	Hs	molecular function	239	1.35e-65
extracellular matrix	Hs	cellular component	346	3.87e-105
identical protein binding	Hs	molecular function	230	1.71e-62
macromolecular complex binding	Hs	molecular function	230	1.71e-62
extracellular exosome	Hs	cellular component	230	1.71e-62

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
calcium ion binding	Pfam	molecular function	2.7E-4