Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S7...'
  2. Gene 'Cisavi.CG.ENS81.R3.1...'

Gene Card

Best human hits

ILF2; STRBP; ZFR

Species

C.savignyi

Unique Gene ID

Cisavi.g00006000

Gene Model ID

Cisavi.CG.ENS81.R3.1686393-1687553

Location

R3:1686392..1687553

Transcript Models and Sequences

  Cisavi.CG.ENS81.R3.1686393-1687553.12157.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
DZF_dom ProSiteProfiles DZF domain
DZF_dom Pfam DZF domain
2-5-oligoadenylate_synth_N ProSiteProfiles 2-5-oligoadenylate synthetase, N-terminal
DZF_dom SMART DZF domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
DNA binding Hs molecular function
RNA binding Hs molecular function
double-stranded RNA binding Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
immune response Hs biological process
membrane Hs cellular component
transferase activity Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
specific granule lumen Hs cellular component
positive regulation of transcription, DNA-templated Hs biological process
tertiary granule lumen Hs cellular component
ficolin-1-rich granule lumen Hs cellular component

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 90.9 1.12e-19
DNA binding Hs molecular function 428 1.06e-149
RNA binding Hs molecular function 428 1.06e-149
double-stranded RNA binding Hs molecular function 428 1.06e-149
single-stranded RNA binding Hs molecular function 92.0 4.36e-20
protein binding Hs molecular function 428 1.06e-149
ATP binding Hs molecular function 428 1.06e-149
extracellular region Hs cellular component 428 1.06e-149
nucleus Hs cellular component 428 1.06e-149
chromosome Hs cellular component 90.9 1.12e-19
nucleolus Hs cellular component 428 1.06e-149
cytoplasm Hs cellular component 428 1.06e-149
zinc ion binding Hs molecular function 90.9 1.12e-19
microtubule cytoskeleton Hs cellular component 92.0 4.36e-20
membrane Hs cellular component 428 1.06e-149
transferase activity Hs molecular function 428 1.06e-149
intracellular ribonucleoprotein complex Hs cellular component 428 1.06e-149
specific granule lumen Hs cellular component 428 1.06e-149
tertiary granule lumen Hs cellular component 428 1.06e-149
ficolin-1-rich granule lumen Hs cellular component 428 1.06e-149

GO (InterProScan)

4 results

GO Term Analysis Type e-value
RNA binding ProSiteProfiles molecular function 14.866
ATP binding ProSiteProfiles molecular function 14.866
immune response ProSiteProfiles biological process 14.866
transferase activity ProSiteProfiles molecular function 14.866