Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

TRAF2; TRAF3; TRAF4

Species

C.savignyi

Unique Gene ID

Cisavi.g00005969

Gene Model ID

Cisavi.CG.ENS81.R3.1347971-1357962

Location

R3:1347970..1357962

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
MATH/TRAF_dom SMART MATH/TRAF domain
TRAF-like Gene3D TRAF-like
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING_CS ProSitePatterns Zinc finger, RING-type, conserved site
Znf_TRAF ProSiteProfiles Zinc finger, TRAF-type
Znf_TRAF Pfam Zinc finger, TRAF-type
Znf_RING SMART Zinc finger, RING-type
TRAF4_MATH CDD TNF receptor-associated factor 4, MATH domain
Znf_RING ProSiteProfiles Zinc finger, RING-type
TRAF-like SUPERFAMILY TRAF-like
MATH/TRAF_dom ProSiteProfiles MATH/TRAF domain
TNF_rcpt--assoc_TRAF PIRSF TNF receptor-associated factor TRAF
TRAF4 PANTHER TNF receptor-associated factor 4

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
DNA binding Hs molecular function
tumor necrosis factor receptor binding Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
bicellular tight junction Hs cellular component
apoptotic process Hs biological process
signal transduction Hs biological process
activation of NF-kappaB-inducing kinase activity Hs biological process
multicellular organism development Hs biological process
zinc ion binding Hs molecular function
membrane Hs cellular component
protein kinase binding Hs molecular function
cell junction Hs cellular component
ubiquitin protein ligase binding Hs molecular function
thioesterase binding Hs molecular function
identical protein binding Hs molecular function
regulation of apoptotic process Hs biological process
positive regulation of protein kinase activity Hs biological process
positive regulation of JNK cascade Hs biological process
metal ion binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
WW domain binding Hs molecular function

GO (Blast)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin ligase complex Hs cellular component 184 1.63e-52
DNA binding Hs molecular function 544 0.0
ubiquitin-protein transferase activity Hs molecular function 184 1.63e-52
signal transducer activity Hs molecular function 184 1.63e-52
receptor binding Hs molecular function 184 1.63e-52
tumor necrosis factor receptor binding Hs molecular function 544 0.0
CD40 receptor binding Hs molecular function 184 1.63e-52
protein binding Hs molecular function 544 0.0
intracellular Hs cellular component 544 0.0
nucleus Hs cellular component 544 0.0
nucleoplasm Hs cellular component 184 1.63e-52
cytoplasm Hs cellular component 544 0.0
mitochondrion Hs cellular component 171 4.81e-47
endosome Hs cellular component 171 4.81e-47
cytosol Hs cellular component 184 1.63e-52
cytoskeleton Hs cellular component 544 0.0
plasma membrane Hs cellular component 544 0.0
bicellular tight junction Hs cellular component 544 0.0
cell cortex Hs cellular component 184 1.63e-52
zinc ion binding Hs molecular function 544 0.0
lipid binding Hs molecular function 184 1.63e-52
cytoplasmic side of plasma membrane Hs cellular component 184 1.63e-52
vesicle membrane Hs cellular component 184 1.63e-52
membrane Hs cellular component 544 0.0
transferase activity Hs molecular function 184 1.63e-52
enzyme binding Hs molecular function 184 1.63e-52
protein kinase binding Hs molecular function 544 0.0
protein phosphatase binding Hs molecular function 184 1.63e-52
cell junction Hs cellular component 544 0.0
mitogen-activated protein kinase kinase kinase binding Hs molecular function 184 1.63e-52
ubiquitin protein ligase binding Hs molecular function 544 0.0
thioesterase binding Hs molecular function 544 0.0
CD40 receptor complex Hs cellular component 184 1.63e-52
identical protein binding Hs molecular function 544 0.0
membrane raft Hs cellular component 184 1.63e-52
sphingolipid binding Hs molecular function 184 1.63e-52
metal ion binding Hs molecular function 544 0.0
perinuclear region of cytoplasm Hs cellular component 544 0.0
WW domain binding Hs molecular function 544 0.0
TRAF2-GSTP1 complex Hs cellular component 184 1.63e-52
AIP1-IRE1 complex Hs cellular component 184 1.63e-52
IRE1-TRAF2-ASK1 complex Hs cellular component 184 1.63e-52

GO (InterProScan)

6 results

GO Term Analysis Type e-value
protein binding Gene3D molecular function 3.0E-63
signal transduction PIRSF biological process 9.8E-69
activation of NF-kappaB-inducing kinase activity CDD biological process 1.74288E-107
zinc ion binding PIRSF molecular function 9.8E-69
regulation of apoptotic process PIRSF biological process 9.8E-69
positive regulation of JNK cascade CDD biological process 1.74288E-107