Aniseed - Gene card

Gene Card

Best human hits

RBPJ; RBPJL

Species

C.savignyi

Unique Gene ID

Cisavi.g00003845

Gene Model ID

Cisavi.CG.ENS81.R19.3883332-3905930

Location

R19:3883331..3905930

Transcript Models and Sequences

Cisavi.CG.ENS81.R19.3883332-3905930.18481.t
Cisavi.CG.ENS81.R19.3883332-3905930.18482.t
Cisavi.CG.ENS81.R19.3883332-3905930.18483.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
BTD_sf	SUPERFAMILY	Beta-trefoil domain superfamily
Beta-trefoil_DNA-bd_dom	SMART	Beta-trefoil DNA-binding domain
p53-like_TF_DNA-bd	SUPERFAMILY	p53-like transcription factor, DNA-binding
RBP-J/Cbf11/Cbf12_DNA-bd_sf	Gene3D	RBP-J/Cbf11/Cbf12, DNA binding domain superfamily
Ig_E-set	SUPERFAMILY	Immunoglobulin E-set
RBP-Jkappa_IPT	CDD	RBP-Jkappa, IPT domain
Beta-trefoil_DNA-bd_dom	Pfam	Beta-trefoil DNA-binding domain
RBP-J/Cbf11/Cbf12_DNA-bd	SMART	RBP-J/Cbf11/Cbf12, DNA binding
RBP-J/Cbf11/Cbf12_DNA-bd	Pfam	RBP-J/Cbf11/Cbf12, DNA binding
Ig-like_fold	Gene3D	Immunoglobulin-like fold

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

67 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
recombinase activity	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
RNA polymerase II repressing transcription factor binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
angiogenesis	Hs	biological process
somitogenesis	Hs	biological process
epithelial to mesenchymal transition	Hs	biological process
MAML1-RBP-Jkappa- ICN1 complex	Hs	cellular component
outflow tract morphogenesis	Hs	biological process
endocardium development	Hs	biological process
endocardium morphogenesis	Hs	biological process
ventricular trabecula myocardium morphogenesis	Hs	biological process
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
DNA recombination	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription initiation from RNA polymerase II promoter	Hs	biological process
humoral immune response	Hs	biological process
Notch signaling pathway	Hs	biological process
positive regulation of transcription of Notch receptor target	Hs	biological process
heart development	Hs	biological process
transcription factor binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
epidermal cell fate specification	Hs	biological process
regulation of gene expression	Hs	biological process
positive regulation of gene expression	Hs	biological process
transcriptional repressor complex	Hs	cellular component
pituitary gland development	Hs	biological process
hemopoiesis	Hs	biological process
neuron differentiation	Hs	biological process
B cell differentiation	Hs	biological process
keratinocyte differentiation	Hs	biological process
negative regulation of ossification	Hs	biological process
positive regulation of BMP signaling pathway	Hs	biological process
somatic stem cell population maintenance	Hs	biological process
dorsal aorta morphogenesis	Hs	biological process
atrioventricular canal development	Hs	biological process
regulation of cell proliferation	Hs	biological process
defense response to bacterium	Hs	biological process
myeloid dendritic cell differentiation	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
cell fate commitment	Hs	biological process
negative regulation of cell differentiation	Hs	biological process
positive regulation of Notch signaling pathway	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein N-terminus binding	Hs	molecular function
regulation of timing of cell differentiation	Hs	biological process
artery morphogenesis	Hs	biological process
arterial endothelial cell fate commitment	Hs	biological process
repressing transcription factor binding	Hs	molecular function
blood vessel lumenization	Hs	biological process
blood vessel endothelial cell fate specification	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
recombinase activity	Hs	molecular function	758	0.0
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	475	1.27e-163
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	758	0.0
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	758	0.0
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	758	0.0
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	758	0.0
RNA polymerase II repressing transcription factor binding	Hs	molecular function	758	0.0
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	758	0.0
MAML1-RBP-Jkappa- ICN1 complex	Hs	cellular component	758	0.0
DNA binding	Hs	molecular function	758	0.0
chromatin binding	Hs	molecular function	758	0.0
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	758	0.0
protein binding	Hs	molecular function	758	0.0
nucleus	Hs	cellular component	758	0.0
nucleoplasm	Hs	cellular component	758	0.0
transcription factor complex	Hs	cellular component	758	0.0
nucleolus	Hs	cellular component	758	0.0
cytoplasm	Hs	cellular component	758	0.0
transcription factor binding	Hs	molecular function	758	0.0
transcriptional repressor complex	Hs	cellular component	758	0.0
sequence-specific DNA binding	Hs	molecular function	758	0.0
protein N-terminus binding	Hs	molecular function	758	0.0
repressing transcription factor binding	Hs	molecular function	758	0.0

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	SMART	molecular function	1.3E-88
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	SMART	molecular function	1.3E-88
DNA binding	SMART	molecular function	4.9E-76
transcription factor activity, sequence-specific DNA binding	SMART	molecular function	4.9E-76
nucleus	SMART	cellular component	4.9E-76
regulation of transcription, DNA-templated	SMART	biological process	2.5E-78