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Gene Card

Best human hits

ZIC2; ZIC3; ZIC4

Species

C.savignyi

Unique Gene ID

Cisavi.g00002604

Gene Model ID

Cisavi.CG.ENS81.R151.104815-106074

Location

R151:104814..106074

Transcript Models and Sequences

  Cisavi.CG.ENS81.R151.104815-106074.04213.t
Cisavi.CG.ENS81.R151.104815-106074.04214.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

44 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
heart looping Hs biological process
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
multicellular organism development Hs biological process
determination of left/right symmetry Hs biological process
pattern specification process Hs biological process
nervous system development Hs biological process
brain development Hs biological process
visual perception Hs biological process
anterior/posterior pattern specification Hs biological process
nuclear body Hs cellular component
cell differentiation Hs biological process
lung development Hs biological process
chromatin DNA binding Hs molecular function
somatic stem cell population maintenance Hs biological process
determination of pancreatic left/right asymmetry Hs biological process
determination of left/right asymmetry in nervous system Hs biological process
sequence-specific DNA binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
positive regulation of sequence-specific DNA binding transcription factor activity Hs biological process
determination of digestive tract left/right asymmetry Hs biological process
determination of liver left/right asymmetry Hs biological process
central nervous system development Hs biological process
adult walking behavior Hs biological process
regulation of smoothened signaling pathway Hs biological process
spinal cord development Hs biological process
positive regulation of protein import into nucleus Hs biological process
inner ear morphogenesis Hs biological process

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 244 6.66e-77
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 244 6.66e-77
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 236 2.93e-73
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 244 6.66e-77
nucleic acid binding Hs molecular function 244 6.66e-77
DNA binding Hs molecular function 244 6.66e-77
transcription factor activity, sequence-specific DNA binding Hs molecular function 244 6.66e-77
protein binding Hs molecular function 244 6.66e-77
nucleus Hs cellular component 244 6.66e-77
nucleoplasm Hs cellular component 244 6.66e-77
cytoplasm Hs cellular component 244 6.66e-77
nuclear body Hs cellular component 236 2.93e-73
chromatin DNA binding Hs molecular function 236 2.93e-73
sequence-specific DNA binding Hs molecular function 244 6.66e-77
metal ion binding Hs molecular function 244 6.66e-77

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 9.8E-5

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