Aniseed - Gene card

Gene Card

Best human hits

ADAMTS1; ADAMTS20; ADAMTS9

Species

C.savignyi

Unique Gene ID

Cisavi.g00002097

Gene Model ID

Cisavi.CG.ENS81.R14.1178811-1210675

Location

R14:1178810..1210675

Transcript Models and Sequences

Cisavi.CG.ENS81.R14.1178811-1210675.18486.t
Cisavi.CG.ENS81.R14.1178811-1210675.18487.t
Cisavi.CG.ENS81.R14.1178811-1210675.18488.t
Cisavi.CG.ENS81.R14.1178811-1210675.18489.t
Cisavi.CG.ENS81.R14.1178811-1210675.18490.t
Cisavi.CG.ENS81.R14.1178811-1210675.18491.t
Cisavi.CG.ENS81.R14.1178811-1210675.18492.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
TSP1_rpt_sf	SUPERFAMILY	Thrombospondin type-1 (TSP1) repeat superfamily
Peptidase_M12B_N	Pfam	Peptidase M12B, propeptide
TSP1_rpt	Pfam	Thrombospondin type-1 (TSP1) repeat
ADAM_spacer1	Pfam	ADAM-TS Spacer 1
TSP1_rpt_sf	Gene3D	Thrombospondin type-1 (TSP1) repeat superfamily
Peptidase_M12B	Pfam	Peptidase M12B, ADAM/reprolysin
MetalloPept_cat_dom_sf	Gene3D	Metallopeptidase, catalytic domain superfamily
ADAM_Cys-rich	SMART	ADAM, cysteine-rich
Pept_M12B_GON-ADAMTSs	ProSiteProfiles	Peptidase M12B, GON-ADAMTSs
Pept_M12B_GON-ADAMTSs	Pfam	Peptidase M12B, GON-ADAMTSs
Peptidase_M12B	ProSiteProfiles	Peptidase M12B, ADAM/reprolysin
TSP1_rpt	ProSiteProfiles	Thrombospondin type-1 (TSP1) repeat
TSP1_rpt	SMART	Thrombospondin type-1 (TSP1) repeat

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
heart valve morphogenesis	Hs	biological process
endopeptidase activity	Hs	molecular function
metalloendopeptidase activity	Hs	molecular function
extracellular region	Hs	cellular component
proteinaceous extracellular matrix	Hs	cellular component
extracellular space	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
proteolysis	Hs	biological process
glycoprotein catabolic process	Hs	biological process
multicellular organism development	Hs	biological process
peptidase activity	Hs	molecular function
metallopeptidase activity	Hs	molecular function
zinc ion binding	Hs	molecular function
positive regulation of signal transduction	Hs	biological process
cell surface	Hs	cellular component
protein transport	Hs	biological process
vesicle-mediated transport	Hs	biological process
hydrolase activity	Hs	molecular function
extracellular matrix organization	Hs	biological process
extracellular matrix	Hs	cellular component
negative regulation of apoptotic process	Hs	biological process
intracellular membrane-bounded organelle	Hs	cellular component
metal ion binding	Hs	molecular function
regulation of developmental pigmentation	Hs	biological process
negative regulation of sprouting angiogenesis	Hs	biological process

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
endopeptidase activity	Hs	molecular function	1368	0.0
metalloendopeptidase activity	Hs	molecular function	1368	0.0
extracellular region	Hs	cellular component	1368	0.0
proteinaceous extracellular matrix	Hs	cellular component	1368	0.0
basement membrane	Hs	cellular component	569	2.26e-178
extracellular space	Hs	cellular component	1368	0.0
endoplasmic reticulum	Hs	cellular component	1368	0.0
heparin binding	Hs	molecular function	569	2.26e-178
peptidase activity	Hs	molecular function	1368	0.0
metallopeptidase activity	Hs	molecular function	1368	0.0
zinc ion binding	Hs	molecular function	1368	0.0
cell surface	Hs	cellular component	1368	0.0
membrane	Hs	cellular component	569	2.26e-178
integral component of membrane	Hs	cellular component	569	2.26e-178
hydrolase activity	Hs	molecular function	1368	0.0
extracellular matrix	Hs	cellular component	1368	0.0
cytoplasmic vesicle	Hs	cellular component	569	2.26e-178
intracellular membrane-bounded organelle	Hs	cellular component	1368	0.0
metal ion binding	Hs	molecular function	1368	0.0

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
metalloendopeptidase activity	Pfam	molecular function	1.6E-75
proteolysis	Pfam	biological process	5.3E-11
metallopeptidase activity	Gene3D	molecular function	1.7E-39
zinc ion binding	Pfam	molecular function	1.6E-75