Aniseed - Gene card

Gene 'Cisavi.CG.ENS81.R0.1...'

Gene Card

Best human hits

SGSM1; SGSM2; TBC1D15

Species

C.savignyi

Unique Gene ID

Cisavi.g00000092

Gene Model ID

Cisavi.CG.ENS81.R0.1881089-1892983

Location

R0:1881088..1892983

Transcript Models and Sequences

Cisavi.CG.ENS81.R0.1881089-1892983.16036.t
Cisavi.CG.ENS81.R0.1881089-1892983.16037.t
Cisavi.CG.ENS81.R0.1881089-1892983.16038.t
Cisavi.CG.ENS81.R0.1881089-1892983.16039.t
Cisavi.CG.ENS81.R0.1881089-1892983.16040.t
Cisavi.CG.ENS81.R0.1881089-1892983.16041.t
Cisavi.CG.ENS81.R0.1881089-1892983.16042.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
Run_dom	SMART	RUN domain
Rab-GTPase_TBC_sf	SUPERFAMILY	Rab-GTPase-TBC domain superfamily
SGSM1/2	CDD	Small G protein signaling modulator 1/2, PH domain
Run_dom_sf	SUPERFAMILY	RUN domain superfamily
Run_dom	ProSiteProfiles	RUN domain
Rab-GTPase-TBC_dom	SMART	Rab-GTPase-TBC domain
Rab-GTPase-TBC_dom	Pfam	Rab-GTPase-TBC domain
Run_dom	Pfam	RUN domain
Rab-GTPase-TBC_dom	ProSiteProfiles	Rab-GTPase-TBC domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
GTPase activator activity	Hs	molecular function
cytoplasm	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
intracellular protein transport	Hs	biological process
endomembrane system	Hs	cellular component
membrane	Hs	cellular component
Rab GTPase binding	Hs	molecular function
cytoplasmic vesicle membrane	Hs	cellular component
regulation of vesicle fusion	Hs	biological process
cytoplasmic vesicle	Hs	cellular component
melanosome	Hs	cellular component
positive regulation of GTPase activity	Hs	biological process
activation of GTPase activity	Hs	biological process

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
GTPase activator activity	Hs	molecular function	560	0.0
protein binding	Hs	molecular function	111	5.70e-25
extracellular region	Hs	cellular component	111	5.70e-25
intracellular	Hs	cellular component	111	5.70e-25
cytoplasm	Hs	cellular component	560	0.0
mitochondrion	Hs	cellular component	111	5.70e-25
Golgi apparatus	Hs	cellular component	560	0.0
cytosol	Hs	cellular component	560	0.0
endomembrane system	Hs	cellular component	560	0.0
membrane	Hs	cellular component	560	0.0
Rab GTPase binding	Hs	molecular function	560	0.0
cytoplasmic vesicle membrane	Hs	cellular component	560	0.0
cytoplasmic vesicle	Hs	cellular component	560	0.0
melanosome	Hs	cellular component	409	3.19e-125
extracellular exosome	Hs	cellular component	111	5.70e-25

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
GTPase activator activity	CDD	molecular function	1.19608E-80