Aniseed - Gene card

Gene 'Cisavi.CG.ENS81.R0.1...'

Gene Card

Best human hits

TAF1B

Species

C.savignyi

Unique Gene ID

Cisavi.g00000046

Gene Model ID

Cisavi.CG.ENS81.R0.1356882-1364630

Location

R0:1356881..1364630

Transcript Models and Sequences

Cisavi.CG.ENS81.R0.1356882-1364630.15064.t
Cisavi.CG.ENS81.R0.1356882-1364630.15065.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
TAF1B/Rrn7	PANTHER	RNA polymerase I transcription initiation factor TAF1B/Rrn7

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase I CORE element sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase I CORE element binding transcription factor recruiting	Hs	molecular function
RNA polymerase I transcriptional preinitiation complex assembly	Hs	biological process
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
RNA polymerase transcription factor SL1 complex	Hs	cellular component
nucleolus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase I promoter	Hs	biological process
termination of RNA polymerase I transcription	Hs	biological process
TBP-class protein binding	Hs	molecular function
positive regulation of gene expression, epigenetic	Hs	biological process
metal ion binding	Hs	molecular function
extracellular exosome	Hs	cellular component
RNA polymerase I core factor complex	Hs	cellular component

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase I CORE element sequence-specific DNA binding	Hs	molecular function	40.4	0.001
transcription factor activity, RNA polymerase I CORE element binding transcription factor recruiting	Hs	molecular function	40.4	0.001
DNA binding	Hs	molecular function	40.4	0.001
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	40.4	0.001
protein binding	Hs	molecular function	40.4	0.001
nucleus	Hs	cellular component	40.4	0.001
nucleoplasm	Hs	cellular component	40.4	0.001
RNA polymerase transcription factor SL1 complex	Hs	cellular component	40.4	0.001
nucleolus	Hs	cellular component	40.4	0.001
TBP-class protein binding	Hs	molecular function	40.4	0.001
metal ion binding	Hs	molecular function	40.4	0.001
extracellular exosome	Hs	cellular component	40.4	0.001
RNA polymerase I core factor complex	Hs	cellular component	40.4	0.001

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
RNA polymerase I CORE element sequence-specific DNA binding	PANTHER	molecular function	2.8E-19
RNA polymerase I transcriptional preinitiation complex assembly	PANTHER	biological process	2.8E-19
transcription from RNA polymerase I promoter	PANTHER	biological process	2.8E-19
RNA polymerase I core factor complex	PANTHER	cellular component	2.8E-19