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GENE CARD

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Gene Card

Best human hits

NLRP12; NOD1; NOD2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00015605

Gene Model ID

NCBI:KH.104266563

Location

KhL162:74933..78549

Transcript Models and Sequences

  NCBI:KH.XM_009863067.1

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
NACHT_NTPase ProSiteProfiles NACHT nucleoside triphosphatase
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

26 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
actin binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
cytoplasm Blast cellular component
mitochondrion Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
enzyme binding Blast molecular function
protein kinase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
nuclear part Blast cellular component
endopeptidase activity Blast molecular function
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
positive regulation of apoptotic process Blast biological process
carbohydrate derivative binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 66.2 3.08e-11
actin binding Hs molecular function 57.4 2.14e-08
protein binding Hs molecular function 66.2 3.08e-11
ATP binding Hs molecular function 66.2 3.08e-11
cytoplasm Hs cellular component 66.2 3.08e-11
mitochondrion Hs cellular component 57.4 2.14e-08
Golgi apparatus Hs cellular component 57.4 2.14e-08
cytosol Hs cellular component 66.2 3.08e-11
cytoskeleton Hs cellular component 57.4 2.14e-08
plasma membrane Hs cellular component 66.2 3.08e-11
COP9 signalosome Hs cellular component 57.4 2.14e-08
cysteine-type endopeptidase activator activity involved in apoptotic process Hs molecular function 66.2 3.08e-11
cell surface Hs cellular component 57.4 2.14e-08
membrane Hs cellular component 66.2 3.08e-11
basolateral plasma membrane Hs cellular component 66.2 3.08e-11
apical plasma membrane Hs cellular component 66.2 3.08e-11
enzyme binding Hs molecular function 57.4 2.14e-08
protein kinase binding Hs molecular function 57.4 2.14e-08
Hsp70 protein binding Hs molecular function 57.4 2.14e-08
vesicle Hs cellular component 57.4 2.14e-08
muramyl dipeptide binding Hs molecular function 57.4 2.14e-08
macromolecular complex Hs cellular component 57.4 2.14e-08
identical protein binding Hs molecular function 66.2 3.08e-11
protein homodimerization activity Hs molecular function 66.2 3.08e-11
peptidoglycan binding Hs molecular function 66.2 3.08e-11
CARD domain binding Hs molecular function 66.2 3.08e-11
Hsp90 protein binding Hs molecular function 57.4 2.14e-08

GO (InterProScan)

No result

GO Term Analysis Type e-value

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