Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000008321
NCBI Reference Sequence	XM_002127846.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg016i13

Plate: R1CiGC18c19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Znf_RING	Pfam	Zinc finger, RING-type
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Cdk-activating_kinase_MAT1_cen	Pfam	Cdk-activating kinase assembly factor MAT1, centre
Znf_RING_CS	ProSitePatterns	Zinc finger, RING-type, conserved site
Znf_RING	SMART	Zinc finger, RING-type
MAT1/Tfb3	PANTHER	Cdk-activating kinase assembly factor MAT1/Tfb3
Znf_RING	ProSiteProfiles	Zinc finger, RING-type
MAT1/Tfb3	TIGRFAM	Cdk-activating kinase assembly factor MAT1/Tfb3

GOSlim

34 results

GO Term	Annotation Origin	Type
G1/S transition of mitotic cell cycle	Orthology	biological process
G2/M transition of mitotic cell cycle	Orthology	biological process
protein binding	Orthology	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
DNA repair	Orthology	biological process
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
transcription initiation from RNA polymerase II promoter	Orthology	biological process
protein phosphorylation	Orthology	biological process
cell cycle	Orthology	biological process
zinc ion binding	Orthology	molecular function
cell proliferation	Orthology	biological process
negative regulation of apoptotic process	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
protein N-terminus binding	Orthology	molecular function
regulation of catalytic activity	Orthology	biological process
molecular transducer activity	Orthology	molecular function
protein serine/threonine kinase activity	Orthology	molecular function
regulation of cellular metabolic process	Orthology	biological process
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
mRNA processing	Orthology	biological process
heart development	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
brain development	Orthology	biological process
positive regulation of catalytic activity	Orthology	biological process
enzyme activator activity	Orthology	molecular function
protein kinase binding	Orthology	molecular function

GO (Orthology)

34 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
regulation of cyclin-dependent protein serine/threonine kinase activity	Hs	biological process
G1/S transition of mitotic cell cycle	Hs	biological process
G2/M transition of mitotic cell cycle	Hs	biological process
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
holo TFIIH complex	Hs	cellular component
cytosol	Hs	cellular component
DNA repair	Hs	biological process
transcription-coupled nucleotide-excision repair	Hs	biological process
nucleotide-excision repair	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
termination of RNA polymerase I transcription	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
transcription initiation from RNA polymerase II promoter	Hs	biological process
transcription elongation from RNA polymerase II promoter	Hs	biological process
7-methylguanosine mRNA capping	Hs	biological process
protein phosphorylation	Hs	biological process
cell cycle	Hs	biological process
adult heart development	Hs	biological process
DNA-dependent ATPase activity	Hs	molecular function
zinc ion binding	Hs	molecular function
cell proliferation	Hs	biological process
RNA polymerase II carboxy-terminal domain kinase activity	Hs	molecular function
ventricular system development	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
positive regulation of cyclin-dependent protein serine/threonine kinase activity	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
protein N-terminus binding	Hs	molecular function
response to calcium ion	Hs	biological process
cyclin-dependent protein serine/threonine kinase activator activity	Hs	molecular function

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	260	7.41e-86
intracellular	Hs	cellular component	39.7	0.002
nucleus	Hs	cellular component	260	7.41e-86
nucleoplasm	Hs	cellular component	260	7.41e-86
holo TFIIH complex	Hs	cellular component	260	7.41e-86
cytosol	Hs	cellular component	260	7.41e-86
DNA-dependent ATPase activity	Hs	molecular function	260	7.41e-86
zinc ion binding	Hs	molecular function	260	7.41e-86
RNA polymerase II carboxy-terminal domain kinase activity	Hs	molecular function	260	7.41e-86
metal ion binding	Hs	molecular function	260	7.41e-86
protein N-terminus binding	Hs	molecular function	260	7.41e-86
cyclin-dependent protein serine/threonine kinase activator activity	Hs	molecular function	260	7.41e-86

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
holo TFIIH complex	TIGRFAM	cellular component	2.9E-96
nucleotide-excision repair	TIGRFAM	biological process	2.9E-96
positive regulation of cyclin-dependent protein serine/threonine kinase activity	TIGRFAM	biological process	2.9E-96
cyclin-dependent protein serine/threonine kinase activator activity	TIGRFAM	molecular function	2.9E-96

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences