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GENE CARD

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Gene Card

Best human hits

HMCN2; NRG1; NRG2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00015125

Gene Model ID

KH2012:KH.S852.8

Location

KhS852:3110..5344

Transcript Models and Sequences

  KH2012:KH.S852.8.v1.A.SL1-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

4 results

cien37244

Plate: VES76_K05

cien88540

Plate: VES84_L05

cien141983

Plate: VES92_P11

cien223561

Plate: VES104_G21

Gene collection 1 (N. Satoh)

1 result

cieg029a12

Plate: R1CiGC20a16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Ig-like_fold Gene3D Immunoglobulin-like fold
Neuregulin_C Pfam Neuregulin, C-terminal
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Ig_sub2 SMART Immunoglobulin subtype 2
Ig_sub SMART Immunoglobulin subtype

GOSlim

38 results

GO Term Annotation Origin Type
transcription cofactor activity Blast molecular function
receptor binding Blast molecular function
integrin binding Blast molecular function
calcium ion binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
axon Blast cellular component
cell body Blast cellular component
synapse Blast cellular component
protein kinase activity Blast molecular function
enzyme binding Blast molecular function
molecular function regulator Blast molecular function
regulation of signal transduction Blast biological process
signaling receptor activity Blast molecular function
extracellular region part Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
plasma membrane part Blast cellular component
cell surface Blast cellular component
cell surface receptor signaling pathway Blast biological process
enzyme activator activity Blast molecular function
protein kinase binding Blast molecular function
cell projection membrane Blast cellular component
cell leading edge Blast cellular component
plasma membrane region Blast cellular component
chemotaxis Blast biological process
phosphotransferase activity, alcohol group as acceptor Blast molecular function
organic substance metabolic process Blast biological process
kinase activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
transcription cofactor activity Hs molecular function 118 7.57e-28
protein tyrosine kinase activity Hs molecular function 134 7.94e-33
Ras guanyl-nucleotide exchange factor activity Hs molecular function 134 7.94e-33
receptor binding Hs molecular function 134 7.94e-33
cytokine activity Hs molecular function 118 7.57e-28
ErbB-2 class receptor binding Hs molecular function 118 7.57e-28
integrin binding Hs molecular function 118 7.57e-28
calcium ion binding Hs molecular function 55.5 8.15e-08
extracellular region Hs cellular component 134 7.94e-33
proteinaceous extracellular matrix Hs cellular component 55.5 8.15e-08
basement membrane Hs cellular component 55.5 8.15e-08
extracellular space Hs cellular component 134 7.94e-33
intracellular Hs cellular component 134 7.94e-33
nucleus Hs cellular component 118 7.57e-28
nucleoplasm Hs cellular component 118 7.57e-28
cytoplasm Hs cellular component 118 7.57e-28
plasma membrane Hs cellular component 134 7.94e-33
integral component of plasma membrane Hs cellular component 118 7.57e-28
cell cortex Hs cellular component 55.5 8.15e-08
growth factor activity Hs molecular function 134 7.94e-33
external side of plasma membrane Hs cellular component 118 7.57e-28
membrane Hs cellular component 134 7.94e-33
integral component of membrane Hs cellular component 134 7.94e-33
cell junction Hs cellular component 55.5 8.15e-08
transmembrane receptor protein tyrosine kinase activator activity Hs molecular function 118 7.57e-28
axon Hs cellular component 118 7.57e-28
dendrite Hs cellular component 118 7.57e-28
axolemma Hs cellular component 118 7.57e-28
receptor tyrosine kinase binding Hs molecular function 118 7.57e-28
extracellular matrix Hs cellular component 55.5 8.15e-08
neuromuscular junction Hs cellular component 118 7.57e-28
cleavage furrow Hs cellular component 55.5 8.15e-08
ErbB-3 class receptor binding Hs molecular function 118 7.57e-28
cell body Hs cellular component 118 7.57e-28
synapse Hs cellular component 118 7.57e-28
chemorepellent activity Hs molecular function 118 7.57e-28
phosphatidylinositol-4,5-bisphosphate 3-kinase activity Hs molecular function 134 7.94e-33

GO (InterProScan)

No result

GO Term Analysis Type e-value

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