Aniseed - Gene card

Gene Card

Best human hits

RABGAP1; TBC1D19; TBC1D7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00015016

Gene Model ID

KH2012:KH.S762.5

Location

KhS762:10608..17578

Transcript Models and Sequences

KH2012:KH.S762.5.v1.A.ND1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000004057

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg016m02

Plate: R1CiGC18e17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Rab-GTPase-TBC_dom	ProSiteProfiles	Rab-GTPase-TBC domain
Rab-GTPase-TBC_dom	Pfam	Rab-GTPase-TBC domain
Rab-GTPase-TBC_dom	SMART	Rab-GTPase-TBC domain
Rab-GTPase_TBC_sf	SUPERFAMILY	Rab-GTPase-TBC domain superfamily

GOSlim

21 results

GO Term	Annotation Origin	Type
signal transducer activity	Blast	molecular function
G-protein coupled receptor activity	Blast	molecular function
GTPase activator activity	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Blast	cellular component
centrosome	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
endomembrane system	Blast	cellular component
tubulin binding	Blast	molecular function
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
positive regulation of GTPase activity	Orthology	biological process
cytoskeletal part	Blast	cellular component
macromolecular complex	Blast	cellular component
microtubule cytoskeleton	Blast	cellular component
enzyme binding	Blast	molecular function
cell projection part	Blast	cellular component
plasma membrane region	Blast	cellular component

GO (Orthology)

3 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
GTPase activator activity	Hs	molecular function
protein binding	Hs	molecular function
positive regulation of GTPase activity	Hs	biological process

GO (Blast)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
signal transducer activity	Hs	molecular function	41.2	0.001
G-protein coupled receptor activity	Hs	molecular function	41.2	0.001
GTPase activator activity	Hs	molecular function	636	0.0
protein binding	Hs	molecular function	636	0.0
cytoplasm	Hs	cellular component	41.2	0.001
centrosome	Hs	cellular component	41.2	0.001
microtubule organizing center	Hs	cellular component	41.2	0.001
cytosol	Hs	cellular component	43.1	2.61e-04
cytoskeleton	Hs	cellular component	41.2	0.001
microtubule associated complex	Hs	cellular component	41.2	0.001
endomembrane system	Hs	cellular component	41.2	0.001
tubulin binding	Hs	molecular function	41.2	0.001
membrane	Hs	cellular component	41.2	0.001
integral component of membrane	Hs	cellular component	41.2	0.001
Rab GTPase binding	Hs	molecular function	43.1	2.61e-04
cytoplasmic vesicle	Hs	cellular component	43.1	2.61e-04
ciliary basal body	Hs	cellular component	43.1	2.61e-04

GO (InterProScan)