Login
Help

GENE CARD

Submit your Data

  1. Gene 'KH2012:KH.S621.5'

Gene Card

Best human hits

SDAD1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00014839

Gene Model ID

KH2012:KH.S621.5

Location

KhS621:4063..11252

Transcript Models and Sequences

  KH2012:KH.S621.5.v1.A.nonSL10-1
KH2012:KH.S621.5.v1.A.nonSL2-1
KH2012:KH.S621.5.v1.A.nonSL3-1
KH2012:KH.S621.5.v1.A.nonSL4-1
KH2012:KH.S621.5.v1.A.nonSL5-1
KH2012:KH.S621.5.v1.A.nonSL6-1
KH2012:KH.S621.5.v1.A.nonSL7-1
KH2012:KH.S621.5.v1.A.nonSL8-1
KH2012:KH.S621.5.v1.A.nonSL9-1
KH2012:KH.S621.5.v1.R.ND1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000009198
NCBI Reference Sequence XM_002127175.4
NCBI Reference Sequence XM_009863656.2
Collections

Gateway full ORF

2 results

cien29816

Plate: VES75_I02

cien74147

Plate: VES82_C01

Gene collection 1 (N. Satoh)

2 results

cicl042h20

Plate: R1CiGC12p15

ciad044d12

Plate: R1CiGC04d04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
SDA1_dom Pfam SDA1 domain
Sda1 PANTHER Sda1
ARM-type_fold SUPERFAMILY Armadillo-type fold
Uncharacterised_NUC130/133_N Pfam Uncharacterised domain NUC130/133, N-terminal

GOSlim

7 results

GO Term Annotation Origin Type
binding Orthology molecular function
intracellular Orthology cellular component
nucleus Orthology cellular component
nucleolus Orthology cellular component
protein transport Orthology biological process
intracellular protein transport Orthology biological process
organelle organization Orthology biological process

GO (Orthology)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ribosomal large subunit export from nucleus Hs biological process
binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleolus Hs cellular component
protein transport Hs biological process
actin cytoskeleton organization Hs biological process
ribosome biogenesis Hs biological process
ribosomal large subunit biogenesis Hs biological process

GO (Blast)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
binding Hs molecular function 776 0.0
intracellular Hs cellular component 776 0.0
nucleus Hs cellular component 776 0.0
nucleolus Hs cellular component 776 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
ribosomal large subunit export from nucleus PANTHER biological process 3.7E-266
binding SUPERFAMILY molecular function 2.52E-14
actin cytoskeleton organization PANTHER biological process 3.7E-266
ribosomal large subunit biogenesis PANTHER biological process 3.7E-266

Back to Top