Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

AGBL4; AGBL5; AGTPBP1

Unique Gene ID

Cirobu.g00014578

Gene Model ID

KH2012:KH.S494.1

Location

KhS494:35289..41988

Transcript Models and Sequences

  KH2012:KH.S494.1.v1.B.ND1-1

External Database Gene Card

External database links

1 result

Collections

Gene collection 1 (N. Satoh)

1 result

cieg024l03

Plate: R1CiGC19o14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Peptidase_M14 Pfam Peptidase M14, carboxypeptidase A
M14_AGBL5-like CDD Cytosolic carboxypeptidase-like protein 5 catalytic domain

GOSlim

30 results

GO Term Annotation Origin Type
binding Blast molecular function
nucleus Orthology cellular component
nucleolus Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
Golgi apparatus Blast cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
proteolysis Orthology biological process
peptidase activity Orthology molecular function
metallopeptidase activity Orthology molecular function
zinc ion binding Orthology molecular function
microtubule cytoskeleton Orthology cellular component
tubulin binding Orthology molecular function
hydrolase activity Orthology molecular function
midbody Orthology cellular component
cell projection Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Orthology molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
cytoskeletal part Orthology cellular component
cellular protein modification process Orthology biological process
extracellular region part Orthology cellular component
immune system process Orthology biological process
defense response Orthology biological process
cytoplasmic part Blast cellular component
microtubule organizing center Blast cellular component
cell projection part Blast cellular component
plasma membrane region Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
carboxypeptidase activity Hs molecular function
metallocarboxypeptidase activity Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
spindle Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
proteolysis Hs biological process
peptidase activity Hs molecular function
metallopeptidase activity Hs molecular function
zinc ion binding Hs molecular function
microtubule cytoskeleton Hs cellular component
tubulin binding Hs molecular function
hydrolase activity Hs molecular function
midbody Hs cellular component
protein deglutamylation Hs biological process
intercellular bridge Hs cellular component
metal ion binding Hs molecular function
defense response to virus Hs biological process
mitotic spindle Hs cellular component

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
carboxypeptidase activity Hs molecular function 694 0.0
metallocarboxypeptidase activity Hs molecular function 694 0.0
binding Hs molecular function 149 1.53e-36
nucleus Hs cellular component 694 0.0
nucleolus Hs cellular component 149 1.53e-36
cytoplasm Hs cellular component 694 0.0
mitochondrion Hs cellular component 149 1.53e-36
Golgi apparatus Hs cellular component 173 4.48e-46
centriole Hs cellular component 173 4.48e-46
spindle Hs cellular component 694 0.0
cytosol Hs cellular component 694 0.0
cytoskeleton Hs cellular component 694 0.0
peptidase activity Hs molecular function 694 0.0
metallopeptidase activity Hs molecular function 694 0.0
zinc ion binding Hs molecular function 694 0.0
microtubule cytoskeleton Hs cellular component 694 0.0
tubulin binding Hs molecular function 694 0.0
hydrolase activity Hs molecular function 694 0.0
midbody Hs cellular component 694 0.0
ciliary basal body Hs cellular component 173 4.48e-46
cell projection Hs cellular component 173 4.48e-46
intracellular membrane-bounded organelle Hs cellular component 149 1.53e-36
intercellular bridge Hs cellular component 694 0.0
metal ion binding Hs molecular function 694 0.0
mitotic spindle Hs cellular component 694 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
metallocarboxypeptidase activity CDD molecular function 0.0
proteolysis Pfam biological process 3.1E-12
zinc ion binding Pfam molecular function 3.1E-12
protein deglutamylation CDD biological process 0.0