Aniseed - Gene card

Gene 'KH2012:KH.S390.3'

Gene Card

Best human hits

KCTD1; KCTD15; KCTD21

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00014399

Gene Model ID

KH2012:KH.S390.3

Location

KhS390:21546..24163

Transcript Models and Sequences

KH2012:KH.S390.3.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000006304
NCBI Reference Sequence	XM_009862178.2
NCBI Reference Sequence	XM_018816921.1

Collections

Gateway full ORF

1 result

Gene collection 1 (N. Satoh)

1 result

cilv006d23

Plate: R1CiGC25m10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
T1-type_BTB	Pfam	Potassium channel tetramerisation-type BTB domain
SKP1/BTB/POZ_sf	SUPERFAMILY	SKP1/BTB/POZ domain superfamily
BTB/POZ_dom	SMART	BTB/POZ domain

GOSlim

13 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription corepressor activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
multicellular organism development	Orthology	biological process
transcription factor binding	Orthology	molecular function
identical protein binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
protein homooligomerization	Orthology	biological process
enzyme binding	Blast	molecular function

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription corepressor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
multicellular organism development	Hs	biological process
transcription factor binding	Hs	molecular function
identical protein binding	Hs	molecular function
negative regulation of transcription, DNA-templated	Hs	biological process
protein homooligomerization	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcription corepressor activity	Hs	molecular function	166	1.35e-51
protein binding	Hs	molecular function	172	6.91e-54
nucleus	Hs	cellular component	166	1.35e-51
nucleoplasm	Hs	cellular component	166	1.35e-51
transcription factor binding	Hs	molecular function	166	1.35e-51
identical protein binding	Hs	molecular function	172	6.91e-54
histone deacetylase binding	Hs	molecular function	51.2	4.51e-08
cullin family protein binding	Hs	molecular function	51.2	4.51e-08

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	3.3E-8
protein homooligomerization	Pfam	biological process	1.0E-17