Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000019315
NCBI Reference Sequence	NM_001128857.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad018l18

Plate: R1CiGC03a13

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
HMG_box_dom_sf	SUPERFAMILY	High mobility group box domain superfamily
HMG_box_dom	Pfam	High mobility group box domain
HMG_box_dom_sf	Gene3D	High mobility group box domain superfamily
HMG_box_dom	SMART	High mobility group box domain
HMG_box_dom	ProSiteProfiles	High mobility group box domain

GOSlim

32 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription regulatory region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
nervous system development	Orthology	biological process
visual perception	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region DNA binding	Blast	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
protein heterodimerization activity	Orthology	molecular function
animal organ development	Orthology	biological process
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell differentiation	Orthology	biological process
cell migration	Orthology	biological process
cell development	Orthology	biological process
generation of neurons	Orthology	biological process
intracellular part	Blast	cellular component
RNA binding	Blast	molecular function

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
nervous system development	Hs	biological process
visual perception	Hs	biological process
entrainment of circadian clock	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
skin development	Hs	biological process
nuclear transcription factor complex	Hs	cellular component
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein heterodimerization activity	Hs	molecular function
stem cell differentiation	Hs	biological process
regulation of neuron migration	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcription regulatory region sequence-specific DNA binding	Hs	molecular function	172	1.80e-51
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	176	1.11e-53
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	179	2.56e-55
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	176	1.11e-53
DNA binding	Hs	molecular function	179	2.56e-55
chromatin binding	Hs	molecular function	179	2.56e-55
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	176	1.11e-53
protein binding	Hs	molecular function	179	2.56e-55
nucleus	Hs	cellular component	179	2.56e-55
nucleoplasm	Hs	cellular component	172	1.80e-51
transcription factor complex	Hs	cellular component	172	1.80e-51
cytoplasm	Hs	cellular component	172	1.80e-51
cytosol	Hs	cellular component	172	1.80e-51
miRNA binding	Hs	molecular function	172	1.80e-51
sequence-specific DNA binding	Hs	molecular function	179	2.56e-55
transcription regulatory region DNA binding	Hs	molecular function	172	1.80e-51
nuclear transcription factor complex	Hs	cellular component	179	2.56e-55
protein heterodimerization activity	Hs	molecular function	179	2.56e-55

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences