Gene Card
Best human hits
PRDM14; PRDM4; PRDM9
Unique Gene ID
Cirobu.g00013323
Gene Model ID
KH2012:KH.L95.17
Location
KhL95:14074..20001
Transcript Models and Sequences
External database links
3 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000000034 |
| ENSEMBL | ENSCING00000021191 |
| NCBI Reference Sequence | XM_002130272.3 |
Gateway full ORF
2 results
cien40486
Plate: VES76_O19
cima866988
Plate: VES66_A01
Gene collection 1 (N. Satoh)
2 results
cits031e09
Plate: R1CiGC33n06
cits044g18
Plate: R1CiGC35b11
n/a
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Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_C2H2_type | SMART | Zinc finger C2H2-type |
| SET_dom | SMART | SET domain |
| Znf_C2H2_type | ProSiteProfiles | Zinc finger C2H2-type |
| Znf_C2H2_type | ProSitePatterns | Zinc finger C2H2-type |
| SET_dom | Pfam | SET domain |
| Znf_C2H2_sf | SUPERFAMILY | Zinc finger C2H2 superfamily |
| SET_dom | ProSiteProfiles | SET domain |
GOSlim
22 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| nucleic acid binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| intracellular | Blast | cellular component |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| zinc ion binding | Blast | molecular function |
| transferase activity | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| metabolic process | Blast | biological process |
| organelle organization | Blast | biological process |
| cellular protein modification process | Blast | biological process |
| chromatin binding | Blast | molecular function |
| nucleoplasm part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| enzyme binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
21 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | Hs | molecular function | 177 | 2.79e-48 |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 178 | 1.35e-47 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 178 | 1.35e-47 |
| transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 178 | 1.35e-47 |
| nucleic acid binding | Hs | molecular function | 211 | 8.07e-59 |
| DNA binding | Hs | molecular function | 178 | 1.35e-47 |
| RNA binding | Hs | molecular function | 177 | 2.79e-48 |
| protein binding | Hs | molecular function | 211 | 8.07e-59 |
| intracellular | Hs | cellular component | 211 | 8.07e-59 |
| nucleus | Hs | cellular component | 211 | 8.07e-59 |
| nucleoplasm | Hs | cellular component | 211 | 8.07e-59 |
| chromosome | Hs | cellular component | 211 | 8.07e-59 |
| cytoplasm | Hs | cellular component | 178 | 1.35e-47 |
| methyltransferase activity | Hs | molecular function | 211 | 8.07e-59 |
| zinc ion binding | Hs | molecular function | 178 | 1.35e-47 |
| transferase activity | Hs | molecular function | 211 | 8.07e-59 |
| histone-lysine N-methyltransferase activity | Hs | molecular function | 211 | 8.07e-59 |
| chromatin DNA binding | Hs | molecular function | 177 | 2.79e-48 |
| histone methyltransferase complex | Hs | cellular component | 178 | 1.35e-47 |
| metal ion binding | Hs | molecular function | 211 | 8.07e-59 |
| histone methyltransferase binding | Hs | molecular function | 178 | 1.35e-47 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SMART | molecular function | 3.6E-4 |
| protein binding | Pfam | molecular function | 3.8E-7 |
