Aniseed - Gene card

Gene Card

Best human hits

AC073896.1; CS

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012786

Gene Model ID

KH2012:KH.L55.3

Location

KhL55:6345..8246

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000018403
NCBI Reference Sequence	XM_009863433.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad049i15

Plate: R1CiGC05c20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Citrate_synthase_sf	SUPERFAMILY	Citrate synthase superfamily
Citrate_synth-like_sm_a-sub	Gene3D	Citrate synthase-like, small alpha subdomain
Citrate_synthase_euk	TIGRFAM	Citrate synthase, eukaryotic-type
Citrate_synth-like_lrg_a-sub	Gene3D	Citrate synthase-like, large alpha subdomain
Citrate_synthase	PRINTS	Citrate synthase
Citrate_synthase_AS	ProSitePatterns	Citrate synthase active site
Citrate_synthase	Pfam	Citrate synthase
Citrate_synthase	PANTHER	Citrate synthase

GOSlim

12 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
nucleus	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
endoplasmic reticulum	Blast	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
transferase activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
organic substance metabolic process	Orthology	biological process
oxidation-reduction process	Orthology	biological process
cellular metabolic process	Orthology	biological process

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
citrate (Si)-synthase activity	Hs	molecular function
nucleus	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
carbohydrate metabolic process	Hs	biological process
tricarboxylic acid cycle	Hs	biological process
citrate metabolic process	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
transferase activity	Hs	molecular function
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	Hs	molecular function
extracellular exosome	Hs	cellular component

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	703	0.0
citrate (Si)-synthase activity	Hs	molecular function	703	0.0
nucleus	Hs	cellular component	703	0.0
mitochondrion	Hs	cellular component	703	0.0
mitochondrial matrix	Hs	cellular component	703	0.0
endoplasmic reticulum	Hs	cellular component	45.4	3.40e-05
membrane	Hs	cellular component	703	0.0
integral component of membrane	Hs	cellular component	703	0.0
transferase activity	Hs	molecular function	703	0.0
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	Hs	molecular function	703	0.0
extracellular exosome	Hs	cellular component	703	0.0

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
citrate (Si)-synthase activity	TIGRFAM	molecular function	1.2E-230
tricarboxylic acid cycle	ProSitePatterns	biological process
citrate metabolic process	TIGRFAM	biological process	1.2E-230
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	PANTHER	molecular function	1.7E-191