- Gene 'KH2012:KH.L5.9'
Gene Card
Best human hits
FGD6; PLEKHF1; PLEKHF2
Unique Gene ID
Cirobu.g00012724
Gene Model ID
KH2012:KH.L5.9
Location
KhL5:115743..118662
Transcript Models and Sequences
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000003542 |
| NCBI Reference Sequence | NM_001047992.1 |
Gateway full ORF
2 results
cien55345
Plate: VES78_G23
cien127598
Plate: VES90_D07
Gene collection 1 (N. Satoh)
2 results
cicl050p02
Plate: R1CiGC13n16
citb033j18
Plate: R1CiGC31p16
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_FYVE | Pfam | FYVE zinc finger |
| PH_domain | Pfam | Pleckstrin homology domain |
| PH_domain | SMART | Pleckstrin homology domain |
| PH_domain | ProSiteProfiles | Pleckstrin homology domain |
| Znf_FYVE_PHD | SUPERFAMILY | Zinc finger, FYVE/PHD-type |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| PH-like_dom_sf | Gene3D | PH-like domain superfamily |
| Znf_FYVE-rel | ProSiteProfiles | Zinc finger, FYVE-related |
| PH_Phafin | CDD | Phafin, PH domain |
| Znf_FYVE | SMART | FYVE zinc finger |
GOSlim
29 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| lysosome | Orthology | cellular component |
| lysosomal membrane | Orthology | cellular component |
| endosome | Orthology | cellular component |
| endoplasmic reticulum | Orthology | cellular component |
| Golgi apparatus | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| apoptotic process | Orthology | biological process |
| protein transport | Orthology | biological process |
| membrane | Orthology | cellular component |
| lamellipodium | Blast | cellular component |
| metal ion binding | Orthology | molecular function |
| perinuclear region of cytoplasm | Orthology | cellular component |
| organelle organization | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
| whole membrane | Orthology | cellular component |
| bounding membrane of organelle | Orthology | cellular component |
| anion binding | Orthology | molecular function |
| cytoplasmic vesicle | Orthology | cellular component |
| endomembrane system | Orthology | cellular component |
| early endosome | Orthology | cellular component |
| protein localization to membrane | Orthology | biological process |
| cell projection | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
| cell leading edge | Blast | cellular component |
| enzyme binding | Blast | molecular function |
| molecular function regulator | Blast | molecular function |
GO (Orthology)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| lysosome | Hs | cellular component |
| lysosomal membrane | Hs | cellular component |
| endosome | Hs | cellular component |
| endoplasmic reticulum | Hs | cellular component |
| apoptotic process | Hs | biological process |
| endosome organization | Hs | biological process |
| endosome membrane | Hs | cellular component |
| phosphatidylinositol-5-phosphate binding | Hs | molecular function |
| positive regulation of autophagy | Hs | biological process |
| protein transport | Hs | biological process |
| membrane | Hs | cellular component |
| vesicle organization | Hs | biological process |
| transport vesicle | Hs | cellular component |
| early endosome membrane | Hs | cellular component |
| phosphatidylinositol-3-phosphate binding | Hs | molecular function |
| metal ion binding | Hs | molecular function |
| perinuclear region of cytoplasm | Hs | cellular component |
| phosphatidylinositol-4-phosphate binding | Hs | molecular function |
| protein localization to plasma membrane | Hs | biological process |
GO (Blast)
23 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| ruffle | Hs | cellular component | 131 | 1.12e-34 |
| guanyl-nucleotide exchange factor activity | Hs | molecular function | 131 | 1.12e-34 |
| Rho guanyl-nucleotide exchange factor activity | Hs | molecular function | 131 | 1.12e-34 |
| protein binding | Hs | molecular function | 286 | 4.32e-98 |
| nucleus | Hs | cellular component | 236 | 7.37e-78 |
| cytoplasm | Hs | cellular component | 236 | 7.37e-78 |
| lysosome | Hs | cellular component | 236 | 7.37e-78 |
| lysosomal membrane | Hs | cellular component | 236 | 7.37e-78 |
| endosome | Hs | cellular component | 286 | 4.32e-98 |
| endoplasmic reticulum | Hs | cellular component | 286 | 4.32e-98 |
| Golgi apparatus | Hs | cellular component | 131 | 1.12e-34 |
| cytoskeleton | Hs | cellular component | 131 | 1.12e-34 |
| endosome membrane | Hs | cellular component | 236 | 7.37e-78 |
| phosphatidylinositol-5-phosphate binding | Hs | molecular function | 236 | 7.37e-78 |
| membrane | Hs | cellular component | 286 | 4.32e-98 |
| lamellipodium | Hs | cellular component | 131 | 1.12e-34 |
| transport vesicle | Hs | cellular component | 286 | 4.32e-98 |
| small GTPase binding | Hs | molecular function | 131 | 1.12e-34 |
| early endosome membrane | Hs | cellular component | 286 | 4.32e-98 |
| phosphatidylinositol-3-phosphate binding | Hs | molecular function | 236 | 7.37e-78 |
| metal ion binding | Hs | molecular function | 286 | 4.32e-98 |
| perinuclear region of cytoplasm | Hs | cellular component | 236 | 7.37e-78 |
| phosphatidylinositol-4-phosphate binding | Hs | molecular function | 236 | 7.37e-78 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| metal ion binding | SMART | molecular function | 3.3E-28 |
