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GENE CARD

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Gene Card

Best human hits

COMT; LRTOMT

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012714

Gene Model ID

KH2012:KH.L5.20

Location

KhL5:110262..115509

Transcript Models and Sequences

  KH2012:KH.L5.20.v1.A.nonSL10-1
KH2012:KH.L5.20.v1.A.nonSL1-1
KH2012:KH.L5.20.v1.A.nonSL12-1
KH2012:KH.L5.20.v1.A.nonSL13-1
KH2012:KH.L5.20.v1.A.nonSL14-1
KH2012:KH.L5.20.v1.A.nonSL15-1
KH2012:KH.L5.20.v1.A.nonSL16-1
KH2012:KH.L5.20.v1.A.nonSL2-1
KH2012:KH.L5.20.v1.A.nonSL3-1
KH2012:KH.L5.20.v1.A.nonSL4-1
KH2012:KH.L5.20.v1.A.nonSL5-1
KH2012:KH.L5.20.v1.A.nonSL6-1
KH2012:KH.L5.20.v1.A.nonSL7-1
KH2012:KH.L5.20.v1.A.nonSL8-1
KH2012:KH.L5.20.v1.A.nonSL9-1
KH2012:KH.L5.20.v1.A.SL11-1

External Database Gene Card

External database links

1 result

Database Gene ID
NCBI Reference Sequence XM_002128316.4
Collections

Gateway full ORF

2 results

cien73894

Plate: VES81_O23

cien168535

Plate: VES96_E09

Gene collection 1 (N. Satoh)

1 result

cicl053j07

Plate: R1CiGC14e06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
O-MeTrfase_3 ProSiteProfiles O-methyltransferase, family 3
O-MeTrfase_3 Pfam O-methyltransferase, family 3
SAM-dependent_MTases SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferase

GOSlim

23 results

GO Term Annotation Origin Type
magnesium ion binding Blast molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
endoplasmic reticulum Orthology cellular component
cytosol Blast cellular component
plasma membrane Orthology cellular component
sensory perception of sound Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
transferase activity Orthology molecular function
axon Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
cell body Blast cellular component
postsynaptic membrane Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
cellular aromatic compound metabolic process Orthology biological process
metabolic process Orthology biological process
aromatic compound catabolic process Orthology biological process
neuron development Orthology biological process
animal organ development Orthology biological process
postsynapse Blast cellular component

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
plasma membrane Hs cellular component
catecholamine metabolic process Hs biological process
sensory perception of sound Hs biological process
methyltransferase activity Hs molecular function
O-methyltransferase activity Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
catechol O-methyltransferase activity Hs molecular function
transferase activity Hs molecular function
methylation Hs biological process
neurotransmitter catabolic process Hs biological process
catecholamine catabolic process Hs biological process
auditory receptor cell development Hs biological process
L-dopa O-methyltransferase activity Hs molecular function
orcinol O-methyltransferase activity Hs molecular function

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
magnesium ion binding Hs molecular function 121 8.46e-33
protein binding Hs molecular function 121 8.46e-33
cytoplasm Hs cellular component 121 8.46e-33
mitochondrion Hs cellular component 121 8.46e-33
endoplasmic reticulum Hs cellular component 78.2 1.25e-16
cytosol Hs cellular component 121 8.46e-33
plasma membrane Hs cellular component 121 8.46e-33
methyltransferase activity Hs molecular function 121 8.46e-33
O-methyltransferase activity Hs molecular function 121 8.46e-33
membrane Hs cellular component 121 8.46e-33
integral component of membrane Hs cellular component 121 8.46e-33
catechol O-methyltransferase activity Hs molecular function 121 8.46e-33
transferase activity Hs molecular function 121 8.46e-33
axon Hs cellular component 121 8.46e-33
dendrite Hs cellular component 121 8.46e-33
dendritic spine Hs cellular component 121 8.46e-33
intracellular membrane-bounded organelle Hs cellular component 121 8.46e-33
cell body Hs cellular component 121 8.46e-33
postsynaptic membrane Hs cellular component 121 8.46e-33
metal ion binding Hs molecular function 121 8.46e-33
extracellular exosome Hs cellular component 121 8.46e-33
L-dopa O-methyltransferase activity Hs molecular function 121 8.46e-33
orcinol O-methyltransferase activity Hs molecular function 121 8.46e-33

GO (InterProScan)

1 result

GO Term Analysis Type e-value
O-methyltransferase activity Pfam molecular function 1.4E-13

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