Login
Help

GENE CARD

Submit your Data

  1. Gene 'KH2012:KH.L41.50'

Gene Card

Best human hits

SLC12A2; SLC12A3; SLC12A9

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012604

Gene Model ID

KH2012:KH.L41.50

Location

KhL41:9306..22364

Transcript Models and Sequences

  KH2012:KH.L41.50.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000000757
ENSEMBL ENSCING00000020981
NCBI Reference Sequence XR_001975212.1
Collections

Gateway full ORF

2 results

cien108032

Plate: VES87_J05

cien224230

Plate: VES104_M23

Gene collection 1 (N. Satoh)

1 result

cign068j13

Plate: R1CiGC42j14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
SLC12_C Pfam SLC12A transporter, C-terminal
AA-permease/SLC12A_dom Pfam Amino acid permease/ SLC12A domain

GOSlim

17 results

GO Term Annotation Origin Type
protein binding Blast molecular function
ATP binding Blast molecular function
cytosol Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
ion transport InterProScan biological process
sodium ion transport Blast biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
protein kinase binding Blast molecular function
transmembrane transport Blast biological process
extracellular exosome Blast cellular component
extracellular vesicle Blast cellular component
cation transport Blast biological process
monovalent inorganic cation transport Blast biological process
metal ion transport Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
transporter activity Hs molecular function 789 0.0
protein binding Hs molecular function 302 7.74e-87
ATP binding Hs molecular function 302 7.74e-87
cytosol Hs cellular component 293 1.51e-84
plasma membrane Hs cellular component 789 0.0
integral component of plasma membrane Hs cellular component 302 7.74e-87
sodium:potassium:chloride symporter activity Hs molecular function 302 7.74e-87
ammonium transmembrane transporter activity Hs molecular function 302 7.74e-87
symporter activity Hs molecular function 302 7.74e-87
cation:chloride symporter activity Hs molecular function 789 0.0
sodium:chloride symporter activity Hs molecular function 293 1.51e-84
potassium:chloride symporter activity Hs molecular function 789 0.0
membrane Hs cellular component 789 0.0
integral component of membrane Hs cellular component 789 0.0
apical plasma membrane Hs cellular component 302 7.74e-87
protein kinase binding Hs molecular function 302 7.74e-87
extracellular exosome Hs cellular component 789 0.0
extracellular vesicle Hs cellular component 302 7.74e-87

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transporter activity Pfam molecular function 4.6E-14
ion transport Pfam biological process 4.6E-14
membrane Pfam cellular component 3.8E-91
transmembrane transport Pfam biological process 3.8E-91

Back to Top