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GENE CARD

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Gene Card

Best human hits

DLL1; SNED1

Unique Gene ID

Cirobu.g00012496

Gene Model ID

KH2012:KH.L4.29

Location

KhL4:145110..158783

External Database Gene Card
Collections

Gateway full ORF

5 results

cien72290

Plate: VES81_H16

cima814116

Plate: VES58_D16

cien139117

Plate: VES92_A02

cien151817

Plate: VES93_A21

cien157626

Plate: VES94_D16

Gene collection 1 (N. Satoh)

2 results

cieg014h18

Plate: R1CiGC17h13

cicl011d24

Plate: R1CiGC09p09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
EGF-type_Asp/Asn_hydroxyl_site ProSitePatterns EGF-type aspartate/asparagine hydroxylation site
EGF-like_dom ProSiteProfiles EGF-like domain
CUB_dom CDD CUB domain
EGF-like_CS ProSitePatterns EGF-like, conserved site
Sperma_CUB_dom_sf Gene3D Spermadhesin, CUB domain superfamily
CUB_dom Pfam CUB domain
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site
Sperma_CUB_dom_sf SUPERFAMILY Spermadhesin, CUB domain superfamily
EGF-like_dom SMART EGF-like domain
CUB_dom ProSiteProfiles CUB domain
EGF-like_dom Pfam EGF-like domain

GOSlim

15 results

GO Term Annotation Origin Type
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
adherens junction Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
cell junction Blast cellular component
cytoplasmic vesicle Blast cellular component
membrane raft Blast cellular component
extracellular exosome Blast cellular component
receptor binding Blast molecular function
transcription factor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Notch binding Hs molecular function 122 9.46e-29
calcium ion binding Hs molecular function 122 9.46e-29
protein binding Hs molecular function 122 9.46e-29
extracellular region Hs cellular component 122 9.46e-29
plasma membrane Hs cellular component 122 9.46e-29
integral component of plasma membrane Hs cellular component 122 9.46e-29
adherens junction Hs cellular component 122 9.46e-29
membrane Hs cellular component 122 9.46e-29
integral component of membrane Hs cellular component 122 9.46e-29
apical plasma membrane Hs cellular component 122 9.46e-29
cell junction Hs cellular component 122 9.46e-29
Tat protein binding Hs molecular function 122 9.46e-29
cytoplasmic vesicle Hs cellular component 122 9.46e-29
membrane raft Hs cellular component 122 9.46e-29
extracellular exosome Hs cellular component 116 1.09e-26
scaffold protein binding Hs molecular function 122 9.46e-29

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding SMART molecular function 3.3E-11