Aniseed - Gene card

Gene 'KH2012:KH.L37.23'

Gene Card

Best human hits

AC004691.2; MINDY3; MINDY4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012385

Gene Model ID

KH2012:KH.L37.23

Location

KhL37:187178..192076

Transcript Models and Sequences

KH2012:KH.L37.23.v1.A.nonSL2-1
KH2012:KH.L37.23.v1.A.nonSL3-1
KH2012:KH.L37.23.v1.A.nonSL4-1
KH2012:KH.L37.23.v1.A.nonSL5-1
KH2012:KH.L37.23.v1.A.nonSL6-1
KH2012:KH.L37.23.v1.A.nonSL7-1
KH2012:KH.L37.23.v1.A.SL1-1
KH2012:KH.L37.23.v2.A.nonSL2-1
KH2012:KH.L37.23.v2.A.nonSL3-1
KH2012:KH.L37.23.v2.A.nonSL4-1
KH2012:KH.L37.23.v2.A.nonSL5-1
KH2012:KH.L37.23.v2.A.nonSL6-1
KH2012:KH.L37.23.v2.A.nonSL7-1
KH2012:KH.L37.23.v2.A.SL1-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000002196
NCBI Reference Sequence	XM_002130360.3
NCBI Reference Sequence	XM_009863298.2
NCBI Reference Sequence	XM_009863299.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl002h15

Plate: R1CiGC08i08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
DUF4205	SMART	Domain of unknown function DUF4205
EF_hand_dom	ProSiteProfiles	EF-hand domain
DUF4205	Pfam	Domain of unknown function DUF4205
EF-hand-dom_pair	SUPERFAMILY	EF-hand domain pair

GOSlim

18 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
plasma membrane	Blast	cellular component
integral component of plasma membrane	Blast	cellular component
proteolysis	Orthology	biological process
apoptotic process	Orthology	biological process
peptidase activity	Orthology	molecular function
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
basolateral plasma membrane	Blast	cellular component
hydrolase activity	Orthology	molecular function
nuclear membrane	Orthology	cellular component
transmembrane transport	Blast	biological process
calcium ion binding	InterProScan	molecular function
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
cation transport	Blast	biological process
organic substance transport	Blast	biological process

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
proteolysis	Hs	biological process
apoptotic process	Hs	biological process
peptidase activity	Hs	molecular function
cysteine-type peptidase activity	Hs	molecular function
hydrolase activity	Hs	molecular function
cysteine-type carboxypeptidase activity	Hs	molecular function
nuclear membrane	Hs	cellular component
thiol-dependent ubiquitinyl hydrolase activity	Hs	molecular function
protein K48-linked deubiquitination	Hs	biological process
Lys48-specific deubiquitinase activity	Hs	molecular function

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	361	1.15e-121
nucleus	Hs	cellular component	361	1.15e-121
nucleoplasm	Hs	cellular component	361	1.15e-121
plasma membrane	Hs	cellular component	94.0	1.08e-20
integral component of plasma membrane	Hs	cellular component	94.0	1.08e-20
peptidase activity	Hs	molecular function	361	1.15e-121
cysteine-type peptidase activity	Hs	molecular function	361	1.15e-121
ammonium transmembrane transporter activity	Hs	molecular function	94.0	1.08e-20
water channel activity	Hs	molecular function	94.0	1.08e-20
channel activity	Hs	molecular function	94.0	1.08e-20
membrane	Hs	cellular component	94.0	1.08e-20
integral component of membrane	Hs	cellular component	94.0	1.08e-20
basolateral plasma membrane	Hs	cellular component	94.0	1.08e-20
hydrolase activity	Hs	molecular function	361	1.15e-121
cysteine-type carboxypeptidase activity	Hs	molecular function	361	1.15e-121
nuclear membrane	Hs	cellular component	361	1.15e-121
carbon dioxide transmembrane transporter activity	Hs	molecular function	94.0	1.08e-20
thiol-dependent ubiquitinyl hydrolase activity	Hs	molecular function	361	1.15e-121
Lys48-specific deubiquitinase activity	Hs	molecular function	361	1.15e-121

GO (InterProScan)