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GENE CARD

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  1. Gene 'KH2012:KH.L35.7'

Gene Card

Best human hits

CRLF3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012359

Gene Model ID

KH2012:KH.L35.7

Location

KhL35:75353..77908

Transcript Models and Sequences

  KH2012:KH.L35.7.v1.C.ND1-1
KH2012:KH.L35.7.v1.C.nonSL2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000021539
NCBI Reference Sequence NM_001114128.1
Collections

Gateway full ORF

2 results

cien102752

Plate: VES86_M09

cien82369

Plate: VES83_J06

Gene collection 1 (N. Satoh)

1 result

ciad012m24

Plate: R1CiGC02e06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Ig-like_fold Gene3D Immunoglobulin-like fold
FN3_sf SUPERFAMILY Fibronectin type III superfamily

GOSlim

13 results

GO Term Annotation Origin Type
G1/S transition of mitotic cell cycle Orthology biological process
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
identical protein binding Orthology molecular function
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
cellular component organization Orthology biological process
cell surface receptor signaling pathway Orthology biological process
positive regulation of signal transduction Orthology biological process

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
G1/S transition of mitotic cell cycle Hs biological process
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
negative regulation of cell growth Hs biological process
identical protein binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
positive regulation of JAK-STAT cascade Hs biological process
positive regulation of cell cycle arrest Hs biological process

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 191 1.42e-55
cytoplasm Hs cellular component 191 1.42e-55
cytosol Hs cellular component 191 1.42e-55
plasma membrane Hs cellular component 191 1.42e-55
membrane Hs cellular component 191 1.42e-55
integral component of membrane Hs cellular component 191 1.42e-55
identical protein binding Hs molecular function 191 1.42e-55

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 2.92E-5

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