Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_004227115.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cits044m20

Plate: R1CiGC35f03

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Ribosomal_L5	PIRSF	Ribosomal protein L5
Ribosomal_L5_CS	ProSitePatterns	Ribosomal protein L5, conserved site
Ribosomal_L5_dom_sf	Gene3D	Ribosomal protein L5 domain superfamily
Ribosomal_L5_C	Pfam	Ribosomal protein L5, C-terminal
Ribosomal_L5_dom_sf	SUPERFAMILY	Ribosomal protein L5 domain superfamily
Ribosomal_L5	PANTHER	Ribosomal protein L5
Ribosomal_L5_N	Pfam	Ribosomal protein L5, N-terminal

GOSlim

26 results

GO Term	Annotation Origin	Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Orthology	biological process
RNA binding	Orthology	molecular function
structural constituent of ribosome	Orthology	molecular function
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
ribosome	Orthology	cellular component
translational initiation	Orthology	biological process
protein targeting	Orthology	biological process
SRP-dependent cotranslational protein targeting to membrane	Orthology	biological process
positive regulation of gene expression	Orthology	biological process
membrane	Orthology	cellular component
ubiquitin protein ligase binding	Orthology	molecular function
macromolecular complex	Orthology	cellular component
extracellular exosome	Orthology	cellular component
RNA processing	Orthology	biological process
intracellular organelle part	Orthology	cellular component
proteolysis	Orthology	biological process
protein localization to organelle	Orthology	biological process
regulation of catalytic activity	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function
enzyme regulator activity	Orthology	molecular function

GO (Orthology)

36 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ribosomal large subunit assembly	Hs	biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Hs	biological process
cytoplasmic translation	Hs	biological process
RNA binding	Hs	molecular function
structural constituent of ribosome	Hs	molecular function
protein binding	Hs	molecular function
intracellular	Hs	cellular component
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
ribosome	Hs	cellular component
rRNA processing	Hs	biological process
translation	Hs	biological process
translational initiation	Hs	biological process
protein targeting	Hs	biological process
SRP-dependent cotranslational protein targeting to membrane	Hs	biological process
5S rRNA binding	Hs	molecular function
positive regulation of gene expression	Hs	biological process
membrane	Hs	cellular component
rRNA binding	Hs	molecular function
cytosolic large ribosomal subunit	Hs	cellular component
intracellular ribonucleoprotein complex	Hs	cellular component
ubiquitin protein ligase binding	Hs	molecular function
positive regulation of protein binding	Hs	biological process
negative regulation of proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
macromolecular complex	Hs	cellular component
protein localization to nucleus	Hs	biological process
ribosomal large subunit biogenesis	Hs	biological process
polysomal ribosome	Hs	cellular component
protein stabilization	Hs	biological process
extracellular exosome	Hs	cellular component
negative regulation of ubiquitin protein ligase activity	Hs	biological process
ubiquitin ligase inhibitor activity	Hs	molecular function
negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process	Hs	biological process

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	295	8.48e-104
structural constituent of ribosome	Hs	molecular function	295	8.48e-104
protein binding	Hs	molecular function	295	8.48e-104
intracellular	Hs	cellular component	295	8.48e-104
nucleus	Hs	cellular component	295	8.48e-104
nucleoplasm	Hs	cellular component	295	8.48e-104
nucleolus	Hs	cellular component	295	8.48e-104
cytoplasm	Hs	cellular component	295	8.48e-104
cytosol	Hs	cellular component	295	8.48e-104
ribosome	Hs	cellular component	295	8.48e-104
5S rRNA binding	Hs	molecular function	295	8.48e-104
membrane	Hs	cellular component	295	8.48e-104
rRNA binding	Hs	molecular function	295	8.48e-104
cytosolic large ribosomal subunit	Hs	cellular component	295	8.48e-104
intracellular ribonucleoprotein complex	Hs	cellular component	295	8.48e-104
ubiquitin protein ligase binding	Hs	molecular function	295	8.48e-104
macromolecular complex	Hs	cellular component	295	8.48e-104
polysomal ribosome	Hs	cellular component	295	8.48e-104
extracellular exosome	Hs	cellular component	295	8.48e-104
ubiquitin ligase inhibitor activity	Hs	molecular function	295	8.48e-104

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
structural constituent of ribosome	PANTHER	molecular function	1.9E-95
intracellular	ProSitePatterns	cellular component
ribosome	PANTHER	cellular component	1.9E-95
translation	PANTHER	biological process	1.9E-95

Gene Card

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