Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000003241
NCBI Reference Sequence	NM_001100128.1

Collections

Gateway full ORF

2 results

cima830234

Plate: VES61_F20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
PyrdxlP-dep_Trfase	SUPERFAMILY	Pyridoxal phosphate-dependent transferase
Pyridoxal-P_BS	ProSitePatterns	Pyridoxal-phosphate binding site
PyrdxlP-dep_Trfase_major	Gene3D	Pyridoxal phosphate-dependent transferase, major domain
Aromatic_deC	PRINTS	Aromatic-L-amino-acid decarboxylase
PyrdxlP-dep_de-COase	Pfam	Pyridoxal phosphate-dependent decarboxylase
PyrdxlP-dep_Trfase_dom1	Gene3D	Pyridoxal phosphate-dependent transferase domain 1

GOSlim

32 results

GO Term	Annotation Origin	Type
Golgi membrane	Blast	cellular component
catalytic activity	Blast	molecular function
protein binding	Blast	molecular function
cytoplasm	Blast	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
membrane	Blast	cellular component
enzyme binding	Blast	molecular function
cell junction	Blast	cellular component
axon	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
neuronal cell body	Blast	cellular component
synapse	Blast	cellular component
protein heterodimerization activity	Blast	molecular function
perinuclear region of cytoplasm	Blast	cellular component
extracellular exosome	Blast	cellular component
synapse part	Blast	cellular component
endomembrane system	Blast	cellular component
neuron part	Blast	cellular component
small molecule binding	Blast	molecular function
anion binding	Blast	molecular function
heterocyclic compound binding	Blast	molecular function
organic cyclic compound binding	Blast	molecular function
coenzyme binding	Blast	molecular function
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
intracellular organelle part	Blast	cellular component
intrinsic component of membrane	Blast	cellular component
synaptic membrane	Blast	cellular component
cellular metabolic process	InterProScan	biological process
organic substance metabolic process	InterProScan	biological process

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

33 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	134	7.15e-34
catalytic activity	Hs	molecular function	516	0.0
aromatic-L-amino-acid decarboxylase activity	Hs	molecular function	516	0.0
glutamate decarboxylase activity	Hs	molecular function	134	7.15e-34
histidine decarboxylase activity	Hs	molecular function	479	4.13e-164
protein binding	Hs	molecular function	516	0.0
cytoplasm	Hs	cellular component	516	0.0
Golgi apparatus	Hs	cellular component	134	7.15e-34
cytosol	Hs	cellular component	516	0.0
plasma membrane	Hs	cellular component	134	7.15e-34
synaptic vesicle	Hs	cellular component	516	0.0
membrane	Hs	cellular component	134	7.15e-34
glutamate binding	Hs	molecular function	134	7.15e-34
amino acid binding	Hs	molecular function	516	0.0
lyase activity	Hs	molecular function	516	0.0
carboxy-lyase activity	Hs	molecular function	516	0.0
enzyme binding	Hs	molecular function	516	0.0
protein domain specific binding	Hs	molecular function	516	0.0
cell junction	Hs	cellular component	134	7.15e-34
pyridoxal phosphate binding	Hs	molecular function	516	0.0
axon	Hs	cellular component	516	0.0
synaptic vesicle membrane	Hs	cellular component	134	7.15e-34
anchored component of membrane	Hs	cellular component	134	7.15e-34
cytoplasmic vesicle	Hs	cellular component	134	7.15e-34
L-dopa decarboxylase activity	Hs	molecular function	516	0.0
presynaptic membrane	Hs	cellular component	134	7.15e-34
neuronal cell body	Hs	cellular component	516	0.0
synapse	Hs	cellular component	134	7.15e-34
protein heterodimerization activity	Hs	molecular function	134	7.15e-34
perinuclear region of cytoplasm	Hs	cellular component	134	7.15e-34
inhibitory synapse	Hs	cellular component	134	7.15e-34
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane	Hs	cellular component	134	7.15e-34
extracellular exosome	Hs	cellular component	516	0.0

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
catalytic activity	Gene3D	molecular function	3.7E-108
cellular amino acid metabolic process	PRINTS	biological process	4.7E-76
carboxy-lyase activity	Pfam	molecular function	1.7E-138
carboxylic acid metabolic process	Pfam	biological process	1.7E-138
pyridoxal phosphate binding	Pfam	molecular function	1.7E-138

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences