Aniseed - Gene card

Gene 'KH2012:KH.L19.14'

Gene Card

Best human hits

CSRNP1; CSRNP2; CSRNP3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012048

Gene Model ID

KH2012:KH.L19.14

Location

KhL19:50489..57570

Transcript Models and Sequences

KH2012:KH.L19.14.v1.A.SL1-1
KH2012:KH.L19.14.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004321
NCBI Reference Sequence	XM_002128343.4

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

cieg020l11

Plate: R1CiGC18b22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Cys/Ser-rich_nuc_prot	PRINTS	Cysteine/serine-rich nuclear protein family
CSRNP_N	Pfam	Cysteine/serine-rich nuclear protein, N-terminal domain
Cys/Ser-rich_nuc_prot	PANTHER	Cysteine/serine-rich nuclear protein family

GOSlim

20 results

GO Term	Annotation Origin	Type
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
apoptotic process	Orthology	biological process
positive regulation of apoptotic process	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
dephosphorylation	Orthology	biological process
enzyme binding	Orthology	molecular function
cell surface receptor signaling pathway	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process
anatomical structure development	Orthology	biological process
head development	Orthology	biological process

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
apoptotic process	Hs	biological process
post-embryonic development	Hs	biological process
negative regulation of phosphatase activity	Hs	biological process
phosphatase binding	Hs	molecular function
positive regulation of apoptotic process	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
platelet-derived growth factor receptor signaling pathway	Hs	biological process
skeletal system morphogenesis	Hs	biological process
palate development	Hs	biological process
face morphogenesis	Hs	biological process

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	216	5.72e-62
DNA binding	Hs	molecular function	216	5.72e-62
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	216	5.72e-62
protein binding	Hs	molecular function	209	4.77e-60
nucleus	Hs	cellular component	216	5.72e-62
phosphatase binding	Hs	molecular function	209	4.77e-60
sequence-specific DNA binding	Hs	molecular function	216	5.72e-62

GO (InterProScan)