Aniseed - Gene card

Gene 'KH2012:KH.L18.50'

Gene Card

Best human hits

HASPIN

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011989

Gene Model ID

KH2012:KH.L18.50

Location

KhL18:324210..333883

Transcript Models and Sequences

KH2012:KH.L18.50.v1.A.ND2-1
KH2012:KH.L18.50.v1.A.SL5-1
KH2012:KH.L18.50.v1.A.SL6-1
KH2012:KH.L18.50.v2.A.ND7-1
KH2012:KH.L18.50.v3.A.SL3-1
KH2012:KH.L18.50.v4.A.SL1-1
KH2012:KH.L18.50.v4.A.SL8-1
KH2012:KH.L18.50.v5.A.SL4-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000006151
ENSEMBL	ENSCING00000006153
NCBI Reference Sequence	XM_002119358.4
NCBI Reference Sequence	XM_009863138.2

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

2 results

cieg053o21

Plate: R1CiGC24g23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Kinase-like_dom_sf	SUPERFAMILY	Protein kinase-like domain superfamily
Prot_kinase_dom	ProSiteProfiles	Protein kinase domain
Protein_kinase_ATP_BS	ProSitePatterns	Protein kinase, ATP binding site
TFIIF_beta	Pfam	Transcription initiation factor IIF, beta subunit
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
TFIIF_beta	PANTHER	Transcription initiation factor IIF, beta subunit
TFIIF_interaction	SUPERFAMILY	Transcription Factor IIF, Rap30/Rap74, interaction

GOSlim

24 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein kinase activity	Orthology	molecular function
protein serine/threonine kinase activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
centrosome	Orthology	cellular component
cytoskeleton	Orthology	cellular component
protein phosphorylation	Orthology	biological process
cell cycle	Orthology	biological process
kinase activity	Orthology	molecular function
phosphorylation	Orthology	biological process
transferase activity	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
transcription from RNA polymerase II promoter	InterProScan	biological process
transcription initiation from RNA polymerase II promoter	InterProScan	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
cytoskeletal part	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
organelle organization	Orthology	biological process
protein localization to organelle	Orthology	biological process
nucleoplasm part	InterProScan	cellular component
macromolecular complex	InterProScan	cellular component

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
protein kinase activity	Hs	molecular function
protein serine/threonine kinase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
chromosome	Hs	cellular component
cytoplasm	Hs	cellular component
centrosome	Hs	cellular component
spindle	Hs	cellular component
cytoskeleton	Hs	cellular component
chromatin organization	Hs	biological process
protein phosphorylation	Hs	biological process
cell cycle	Hs	biological process
mitotic sister chromatid cohesion	Hs	biological process
kinase activity	Hs	molecular function
phosphorylation	Hs	biological process
transferase activity	Hs	molecular function
intracellular signal transduction	Hs	biological process
protein localization to chromosome, centromeric region	Hs	biological process
histone kinase activity (H3-T3 specific)	Hs	molecular function

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	301	2.69e-91
protein kinase activity	Hs	molecular function	301	2.69e-91
protein serine/threonine kinase activity	Hs	molecular function	301	2.69e-91
protein binding	Hs	molecular function	301	2.69e-91
ATP binding	Hs	molecular function	301	2.69e-91
nucleus	Hs	cellular component	301	2.69e-91
chromosome	Hs	cellular component	301	2.69e-91
cytoplasm	Hs	cellular component	301	2.69e-91
centrosome	Hs	cellular component	301	2.69e-91
spindle	Hs	cellular component	301	2.69e-91
cytoskeleton	Hs	cellular component	301	2.69e-91
kinase activity	Hs	molecular function	301	2.69e-91
transferase activity	Hs	molecular function	301	2.69e-91
histone kinase activity (H3-T3 specific)	Hs	molecular function	301	2.69e-91

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
protein kinase activity	ProSiteProfiles	molecular function	11.298
ATP binding	ProSiteProfiles	molecular function	11.298
protein phosphorylation	ProSiteProfiles	biological process	11.298
transcription factor TFIIF complex	PANTHER	cellular component	1.4E-74
transcription from RNA polymerase II promoter	PANTHER	biological process	1.4E-74
transcription initiation from RNA polymerase II promoter	PANTHER	biological process	1.4E-74